Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0397 ATGCCCGATTCCGATCCCAAAGCGCCACAGCGTCCGGGGCCGTGGCCACCGGCGCCGTTGCCGGATGCCAAGGCAATGCCGCCTTCTACCTGGGCCAAGAAAACGGGCTTCAGGCCCAAGTTTTCGGGCGAGGCCAATGCCAGCGACTCGGGTCAGATAAGCCTCCAGCCCAAGCCCAAGGAGCCTGACACTAACGTGGATCTCGAAGCAGGTCGGGCCCCGGCCACGGCCCCGACGCCGGCCAACGGCGTGGCTCACCGCGACAAGGTCCCGCCGCTTCCTCCTCCCAAGGATCATGTCGTGAAGAAGCGCAGAGACTCCGACGGAGTCCCCAAGAGTTCCGTTTCCAGCATCAATGGCCAGGCGCCGCCGCCTCCGCCACCTCCTCCGCCGGGGCGGCGGGCTGCGAGTCACGAGGACATTGTGGACGACGATGGTTTCGTGTCGAGGAATTCGCATATGAAGTATGAGCTCAGAGATTCACCTGGTTTAGTTCCCATTGGGGTGTACGGCATTCAGCATTACGTTTCGATATTGGGTTCGTTGATTCTCATTCCGCTTGTTATGGTTCCGGCAATGGGAGGCTCTCGCGAGGATACTTCTGCTGTGGTGTCGACGGTGCTCTTTGTGTCAGGAATGACTACACTGTTGCATACAAATTTTGGGTCGAGGTTGCCCTTGATACAGGGGCCTTCTTTTGTATATCTGGCTCCGGCCTTAGCGATCATCAACTCCTCCGAGTTTCAAGGATTAAATGAAAATAAATTCAAACATATAATGAAGGAGCTGCAGGGGGCTATAATCATTGGATCGGCTTTTCAAACATTCCTTGGATATACCGGACTTATGTCACTGTTAGTAAGGTTAATCAATCCTGTGGTTGTATCCCCAACTATTGCCGCAGTTGGACTTTCATTTTACAGTTATGGTTTTCCGATAGTTGGCACGTGTCTGGAGATTGGTGCAGTGCAGATATTAGTGGTTATTGTGTTTTCTCTTTATCTTCGTAAAATATCTGTTTTTGGGCACCGCATATTTCTAATATATGCAGTTCCTTTGGGTCTCGCAATCACATGGGCAGTTGCTTTCTTGCTGACTGAAGCTGGAGTCTACAACTATAATGGGTGTGACATAAATATACCCTCCTCAAATATGGTTTCTGAGCACTGCAGAAAGCATGTCTCAAAAATGAAGCATTGTCGAGTTGATACTTCTTATGCATTGGAATCATCCCCATGGTTTAGATTTCCGTATCCATTACAATGGGGTACTCCTGTCTTCCATTGGAAAATGGCTCTTGTGATGTGCGTGGTTTCCTTGATCTCATCTGTTGATTCGGTTGGTTCATATCATGCATCTTCTTTATTGGTAGCATCTCGTCCCCCGACTCCTGGAGTTCTTAGTCGAGGAATTGGTTTGGAGGGTCTTTCTAGTGTCTTGGCTGGTCTTTGGGGAACTGGAACAGGGTCTACTACCTTAACTGAAAATGTTCATACCATTGCCGTCACTAAAATGGGAAGCCGCAGAGCAGTTCAATTGGGTGCATGCTTCCTGATACTGTTGTCGCTTGTGGGTAAGGTGGGAGGGTTCATTGCTTCAATTCCTGAAGTCATGGTCGCTGGTCTCTTATGCTTTATGTGGGCAATGCTTACAGCTTTGGGCTTGTCAAATCTACGCTATAGTGAGGCTGGAAGCTCTCGCAACATCATCATAATTGGGTTATCACTGTTTTTCTCTCTTTCCGTACCTGCCTACTTTCAACAATACGGCATCTCCCCACATTCCAACTCGTCAGTGCCCAGTTACTTTCAACCTTACATTGTGGCTTCTCATGGGCCTTTCCGCACCCAATATGGAGGGTTAAACTATTTCCTGAACACAACCTTTTCACTACACATGGTAGTAGCTTTTCTTGTTGCTGTCATCTTGGATAATACCGTGCCTGGCAGTAAGCAAGAACGTGGAGTATACGTCTGGTCGGAAACTGAAGTTGCTAGAAGGGAGCCTGCTGTTGCTAATGACTACGAGTTACCTTTGAGAGTTGGTCGGATCTTCAGATGGGTGAAGTGGGTTGGCCTGTAA 2082 0.4918 MPDSDPKAPQRPGPWPPAPLPDAKAMPPSTWAKKTGFRPKFSGEANASDSGQISLQPKPKEPDTNVDLEAGRAPATAPTPANGVAHRDKVPPLPPPKDHVVKKRRDSDGVPKSSVSSINGQAPPPPPPPPPGRRAASHEDIVDDDGFVSRNSHMKYELRDSPGLVPIGVYGIQHYVSILGSLILIPLVMVPAMGGSREDTSAVVSTVLFVSGMTTLLHTNFGSRLPLIQGPSFVYLAPALAIINSSEFQGLNENKFKHIMKELQGAIIIGSAFQTFLGYTGLMSLLVRLINPVVVSPTIAAVGLSFYSYGFPIVGTCLEIGAVQILVVIVFSLYLRKISVFGHRIFLIYAVPLGLAITWAVAFLLTEAGVYNYNGCDINIPSSNMVSEHCRKHVSKMKHCRVDTSYALESSPWFRFPYPLQWGTPVFHWKMALVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVQLGACFLILLSLVGKVGGFIASIPEVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIIGLSLFFSLSVPAYFQQYGISPHSNSSVPSYFQPYIVASHGPFRTQYGGLNYFLNTTFSLHMVVAFLVAVILDNTVPGSKQERGVYVWSETEVARREPAVANDYELPLRVGRIFRWVKWVGL* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0397 693 MobiDBLite consensus disorder prediction 91 110 - -
Vra4g0397 693 MobiDBLite consensus disorder prediction 1 24 - -
Vra4g0397 693 MobiDBLite consensus disorder prediction 1 138 - -
Vra4g0397 693 MobiDBLite consensus disorder prediction 45 59 - -
Vra4g0397 693 MobiDBLite consensus disorder prediction 120 134 - -
Vra4g0397 693 Pfam Permease family 169 586 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vra4g0397 693 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 29 693 - -
Vra4g0397 693 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 29 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0397 Vra-Chr4 6891361 6897719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0397 22 693 Organic Solute Cotransporters AT2G27810 69.510 0.0 940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0397 - - gmx:100780211 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0397 4 6891361 6897719 Vra4g0397 4 6891361 6897719 ECH
Vra4g0397 4 6891361 6897719 Vra2g0818 2 7453258 7464274 PCT