Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0392 ATGCCAGCCCCCAAGAGCAGCCGCAACGGCCAGTCCGAGAGTCACCGGCGGAGAAGAACATCCTCCTTCCATGGCCAGGCCGCCGTGTCCGTCGTTCAGCTTCCCCGTCGGAGTACGGTTTCCGACCTCCAGTCCCTCACGAGAATCGCCGGATCGGCGCCGGATTGTCCTCCGAGACAGCCACCGAAGATGCTGCTAAAGGTAACCGTGCCGAGAAGCCTCTCGCCCGTGCAGGTGCTGATGACGCCGGAATCCACCGTTAGCGACCTCATAGAGGCGGCGCTGCGACAGTACATAAAGGAAAGTCGCCGCCCTATCTTGCCGGCCAACACAGCCTTCGATTTCGACCTCCATTATTCACAGTTTAGTCTAGAAAGTTTGGATAGGGAGGAAAATCTGATGGAACTTGGATCTAGGAATTTCTTTATGTGTCCGCGAAAGCCTCGGACGACCTTGGAAGGTGTAACGACGCCGTTTGCGTCCTGTGCCAAAGAAGCGGAGAAGTTGAGGGAAAGTAGTGGTGGTTGTGGCTTTACTTGGTTCAAGCTCATGCAATTCATGATGTGA 567 0.5573 MPAPKSSRNGQSESHRRRRTSSFHGQAAVSVVQLPRRSTVSDLQSLTRIAGSAPDCPPRQPPKMLLKVTVPRSLSPVQVLMTPESTVSDLIEAALRQYIKESRRPILPANTAFDFDLHYSQFSLESLDREENLMELGSRNFFMCPRKPRTTLEGVTTPFASCAKEAEKLRESSGGCGFTWFKLMQFMM* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0392 188 PANTHER BNAC05G50380D PROTEIN 4 186 IPR040358 -
Vra4g0392 188 PANTHER EXPRESSED PROTEIN 4 186 - -
Vra4g0392 188 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0392 Vra-Chr4 6808799 6809702 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0392 - - gmx:100796036 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0392 4 6808799 6809702 Vra4g0392 4 6808799 6809702 ECH
Vra4g0392 4 6808799 6809702 Vra2g0814 2 7378633 7380041 PCT