Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0332 ATGGAGAAAGAAACAGAGATGAAGCAATCCAAGTTCAAGAGGATTTGTGTCTTCTGTGGCAGTAGTCCAGGGAACAAAACTACTTACAAGGACGCTGCTATTGAGCTTGGAAGGGAATTGGTGTCAAGAAACATCGATCTAGTATATGGAGGGGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTACGAAGGTGGTCGCCATGTAATCGGAGTTATTCCCAAGACACTTATGCCAAGAGAGCTCACTGGAGAAACAGTGGGGGAAGTGAAGGCAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCCAAACGTTCTGATGCCTTTATTGCCTTACCTGGTGGTTATGGGACACTTGAGGAACTCCTTGAGGTGATAACATGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTTAATGTTGATGGATACTACAATACCTTTTTGTCTTTCATTGACAAAGCTGTGGAAGAAGGGTTCATCAGCCCCACTGCACGCCATATAATTGTATCAGCACCAACACCAAAAGAACTTGTCAAAGAGATGGAGGAGTATTTCCCACAACATGAAAGAGTTGTCTCCAAGGTAAGCTGGGAGCGTGAACAACTACATTAG 630 0.4492 MEKETEMKQSKFKRICVFCGSSPGNKTTYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYEGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNTFLSFIDKAVEEGFISPTARHIIVSAPTPKELVKEMEEYFPQHERVVSKVSWEREQLH* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0332 209 Gene3D - 2 189 - -
Vra4g0332 209 PANTHER LOG FAMILY PROTEIN YJL055W 1 209 - -
Vra4g0332 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Vra4g0332 209 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 209 - -
Vra4g0332 209 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Vra4g0332 209 SUPERFAMILY MCP/YpsA-like 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0332 Vra-Chr4 6050016 6053510 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0332 K22522 - gmx:100811156 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0332 4 6050016 6053510 Vra4g0332 4 6050016 6053510 ECH
Vra4g0332 4 6050016 6053510 Vra2g0735 2 6329660 6333598 PCT