Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0322 ATGGCCGCCAACGTTCGCAGAGCTACCTATCGTTTCCTCCCTGCCGTAGACAGAGATTCACTCTCCGATTCCACCTTTGAATTCGATGAATCTGATCTCTACAACTCTGCAAACGCTAACTCTTCGGAATTCTGCAAATCTGTACGCTCCTCGAGATTCCACAGTAACTCCTCTGTTACCGTCGGCCGTGTCGGTGCTTCGGGATCGCTGCCGGTGAACGTACCGGACTGGTCGAAGATCCTCGGCAACGAGTACGGACAGAACCGGAGGAGGAACTATGACTACGAAGAACCTCAAAGCGATGAGGAGGAAGGAGGAGGGAGAGTTCCTCCGCACGAGTTTCTGGCGAAAACGAGAATCGCTTCCTTGTCAGTGCACGAAGGAGTTGGGAGAACGCTCAAAGGACGCGATCTTAGTAGAGTTCGAAACGCGATTTGGGCGAAAACGGGATTCCAAGATTAG 462 0.5238 MAANVRRATYRFLPAVDRDSLSDSTFEFDESDLYNSANANSSEFCKSVRSSRFHSNSSVTVGRVGASGSLPVNVPDWSKILGNEYGQNRRRNYDYEEPQSDEEEGGGRVPPHEFLAKTRIASLSVHEGVGRTLKGRDLSRVRNAIWAKTGFQD* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0322 153 Pfam Senescence regulator 42 153 IPR007608 -
Vra4g0322 153 MobiDBLite consensus disorder prediction 88 111 - -
Vra4g0322 153 PANTHER EMB|CAB72159.1 4 153 - -
Vra4g0322 153 MobiDBLite consensus disorder prediction 89 110 - -
Vra4g0322 153 PANTHER EMB|CAB72159.1 4 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0322 Vra-Chr4 5911762 5912547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0322 - - pvu:PHAVU_005G134900g 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0322 4 5911762 5912547 Vra4g0322 4 5911762 5912547 ECH
Vra4g0322 4 5911762 5912547 Vra2g0724 2 6200270 6201208 PCT