Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0305 ATGGCCAGAGGTTCCTCTCAGTCTCAGTCCTCCACTTCAACGACCGCCCGACCAGGAATCGCGGCTCCCCGCGGTTCGGCTGCTGCCACCGCCGGCATGCGCCGTCGCCGTGTTGCTAGTGGAAACAGCTCCACCACCACCAGTGTGGGCGGCGGCGGAGGCGGCAACATGCTGAGGTTCTACACGGACGATGCTCCCGGGCTGAAGATTTCACCGACGGTGGTGCTGGTGATGAGCCTCTGCTTCATCGGCTTCGTCACCGCCCTCCACGTCTTCGGCAAACTCTACCGCTCCAAATCTGGCGGCGCTTGA 312 0.6378 MARGSSQSQSSTSTTARPGIAAPRGSAAATAGMRRRRVASGNSSTTTSVGGGGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRSKSGGA* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0305 103 MobiDBLite consensus disorder prediction 1 19 - -
Vra4g0305 103 PANTHER SEC61 SUBUNIT BETA 1 102 IPR030671 GO:0005784|GO:0006886
Vra4g0305 103 PIRSF Sec61_beta 5 101 IPR030671 GO:0005784|GO:0006886
Vra4g0305 103 Pfam Sec61beta family 55 93 IPR016482 -
Vra4g0305 103 MobiDBLite consensus disorder prediction 37 52 - -
Vra4g0305 103 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 102 - -
Vra4g0305 103 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0305 Vra-Chr4 5755182 5755832 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0305 K09481 - gmx:100814692 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0305 4 5755182 5755832 Vra2g0694 2 5903877 5904605 PCT