Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0296 ATGCAGCAGACCCCAAAGACAAGAAGTAGCTCCTCTGAAGTGCCTCAGAAAGTGTCCCCTCGTGGTGGTGGACGCCAACTCAGGCCTGCCACGCTAGATACTGCATCTTCATCAAACCAAGCTCACAAAACTTCAAAGGATCATAGAAGTCCTAAAGTCACTGAGCGCAGATCACCCAGAAGTCCAGCTCCAGAGAGGAAGCGTCCAAGCAGAATATCTGAATTAGAATCTCAGATTTCTCAACTCAAAGAGGATTTGAAGGTTGTGAGGAACCAGCTCAGTTTGTCTGACTCATCCAAGAAGCAAGCTCAGCAAGATGCAGAAGAGTCCAAGAAACAACTATTTGCCGTATCTGTGGAGCTTGAAGAATCTCAACAGCAACTTCTGAAGTTCTCTGCTACTGAACAGGCTCGTGTTATTGAGCTCCAGAAAACTATAGAAGAGCATGATAAGGCGTGGCAATCGGAACTCAAGGCTGCCCAACAGAAGCTCTCAGACAACACTTCGGCACTGACCTCTGCTATCGATGAAATTCAGCAGCTCAAGGTTCAACTTGAATTGGTAGCTAATTGTGAGAATGCACACACCCAAATTGCAGAATCATCGGACGTGGAATTACTGAACTTGAAGGATAACTTGGCAGAATCACTTTCCCTTGTGGAGAACATGAAAAATCAACTCAGGGATTCTAAAGAGTCAGGTCAGGCACAAGCTTTGGTCAACGAGACTTTGCGACAACTTGAAGCTGCAAAAAGAACTGTTGAGTTCCTAAGAGCTGATGCTGCAAAAGCTGTGCATGGCTACAACTCTGCTGCTTCAGAATTAGACCAATCTAGAACACGTGTGGACACACTTGAGACACTAGTCAGTAAACTTGAGTTTGGCCTCATTAGTAACAAAGGCAACCATTCTTTAAATGTTGCAGATGATGGGAACATGGAGCTGAAAGCTGAGATATCACAAAAGGGTGAGGATCTTAATCACACTGAAGAAGAAATTTATTCTTTGAGGTCTGCCATAGAGACTGATGATGAGACTAAGCACCTGGAAGAACATATTCAGTGTTCAGTGAAGCTCAGGAAAGCCTATGAGTTGATTGAGCAGATAAAATCAGAATCAAGCCAGAGGGAATCCGAGCTAGAGGTAGAATTGAAAAGAAAGAATGCTGATATTGAACATTTGAAGGCTAATCTATTGGATAAGGAAACTGAGTTGCAGGGCATTGTGGAGGAGAATGAGAAGTTGAATTTGCAGCTTCAAAAGAGAAATTCATCCCAAAGAGAGCTTGAACTTAAAAAGGAGCTTCGAAAACTAGATGAATGTGTGGCTGAGTTAAAGGGTGATCTAATGGACAAGGAAACAACATTGCAAAACATATCAGAAGAGAATGAAATGCTGAAGTTGGAGCTCAGTAAGAGGTTTGGACACGGTAGTAAAGTGGGGGAGGAAGTTGCTGCAGAACTTGAGGTTGCTAAGGCTGCCGAACGTGAGGCTGTTATGAAACTTGGTATTTTGATGGAAGATGTAGAAAGGAGCAATCGAAAGGCGGAGAGGGTGGCTGAGCAGCTGGAAGCGTCTCAGGCAGCAAATTCAATAGTAGAAGCTGAACTGAGAAGATTGAAGGTGCAGTCTGATCAATGGAGGAAGGCTGCAGAAGCAGCTGCTGCTATGCTCTCAGCAGGGAACAATGGGAAGTTGACTGAGAGATCAATGTCTTTAGACAACAACTATAACTCTATGATGAATAAGTACTCACCTTTCTGTGAAGAACTTGATGATGATTTTCAGACCAAGAGAAATGGCAACATGCTGAAGAAGATTGGGATCTTGTGGAGGAAACCTCAAAAATAG 1851 0.436 MQQTPKTRSSSSEVPQKVSPRGGGRQLRPATLDTASSSNQAHKTSKDHRSPKVTERRSPRSPAPERKRPSRISELESQISQLKEDLKVVRNQLSLSDSSKKQAQQDAEESKKQLFAVSVELEESQQQLLKFSATEQARVIELQKTIEEHDKAWQSELKAAQQKLSDNTSALTSAIDEIQQLKVQLELVANCENAHTQIAESSDVELLNLKDNLAESLSLVENMKNQLRDSKESGQAQALVNETLRQLEAAKRTVEFLRADAAKAVHGYNSAASELDQSRTRVDTLETLVSKLEFGLISNKGNHSLNVADDGNMELKAEISQKGEDLNHTEEEIYSLRSAIETDDETKHLEEHIQCSVKLRKAYELIEQIKSESSQRESELEVELKRKNADIEHLKANLLDKETELQGIVEENEKLNLQLQKRNSSQRELELKKELRKLDECVAELKGDLMDKETTLQNISEENEMLKLELSKRFGHGSKVGEEVAAELEVAKAAEREAVMKLGILMEDVERSNRKAERVAEQLEASQAANSIVEAELRRLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSMSLDNNYNSMMNKYSPFCEELDDDFQTKRNGNMLKKIGILWRKPQK* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0296 616 Coils Coil 240 260 - -
Vra4g0296 616 Coils Coil 377 418 - -
Vra4g0296 616 Coils Coil 206 226 - -
Vra4g0296 616 MobiDBLite consensus disorder prediction 1 78 - -
Vra4g0296 616 Coils Coil 442 469 - -
Vra4g0296 616 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 3 616 - -
Vra4g0296 616 Coils Coil 72 92 - -
Vra4g0296 616 Coils Coil 506 543 - -
Vra4g0296 616 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 3 616 IPR029688 -
Vra4g0296 616 MobiDBLite consensus disorder prediction 1 17 - -
Vra4g0296 616 MobiDBLite consensus disorder prediction 42 78 - -
Vra4g0296 616 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0296 Vra-Chr4 5649500 5655708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0296 - - gmx:100798050 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0296 4 5649500 5655708 Vra4g0296 4 5649500 5655708 ECH
Vra4g0296 4 5649500 5655708 Vra2g0674 2 5660710 5666724 PCT