Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0217 ATGGACGAAAAGAGAAAGGCATCAAAGAAGGACACAGCTTCCAGCAGCCAAGCCTCTTCTTCATCAAGGTCATTATTCTCAAGGAGTACCTCTACTTCAAACGCACCTCTCCTTAGAAGCTTCTCCCAGAAGAATTCTTCGTCTTCTTCTTCCAAATGCAACAACAATCTTCCTCGGAGCTTCTCACAGAAGAACCCTTCCATCGGTCGGAAATGCACCAATATAGCTAAAGAACAGAAAGCACGTTTTTACATAATGAGAAGGTGTGTGGCCATGTTAGTTTGCTGGCACAAGCATGGGGATTCATGA 309 0.4434 MDEKRKASKKDTASSSQASSSSRSLFSRSTSTSNAPLLRSFSQKNSSSSSSKCNNNLPRSFSQKNPSIGRKCTNIAKEQKARFYIMRRCVAMLVCWHKHGDS* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0217 102 MobiDBLite consensus disorder prediction 12 70 - -
Vra4g0217 102 MobiDBLite consensus disorder prediction 1 70 - -
Vra4g0217 102 PANTHER DVL FAMILY PROTEIN 1 102 - -
Vra4g0217 102 PANTHER DVL13 1 102 - -
Vra4g0217 102 Pfam DVL family 77 95 IPR012552 GO:0008285
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0217 Vra-Chr4 4892094 4893167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0217 - - pvu:PHAVU_005G145700g 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0217 4 4892094 4893167 Vra2g0585 2 4630746 4631782 PCT