Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1217 ATGAGAATCACGTTGGAGCCGAGCTCGGAGCCGAGCCCAAGCCGCTCCCAAACTCCCAAAGACGAAGTCGAGTGGGTCCCACTTGCCAAGCACCCTCTCTTCACCGCACACGGCGGCGCCGCCGTTTCCGGTTATCGGAATCTCCTGGCCTGGGACGGAGCCTCGCGCCTCTACTTCTGGGACACGAACAGCCGCATTCTCCACCGCCTATCTCTCCGACTTGGCGACCCCGATCCCTCTTCCGTGCTCGCCTCCTCTCCTTCGAAGGTGTTGCAAGCAGACGCCGAGCTCGATTTCGACGTCCACAAAATCTCCGTCAACAGGAATGGAACAGCGATACTCCTTTTCGGTTCCGAAACGCTCTCTGTTATGTATCTTTACGGACGCGCATCTAAGAAGGACGTGAACTTGATTTGCAGGACTATCACTGTTGGTTCTCAGACATATTCCACTGGTGGCAATAATATTCGGGTGTTACAAGCATTATGGCACCCTTACAGTGATACTCATTTGGGGATTCTTTCTTCTGACTCAGTTTTCAGACTTTTCAACCTTGCTGTGGATCCTTTGCAACCAGAGCAAGAATATTATTTACAGCCTGTCGAGCCTGGTAGATTTAGAAATGCCTCATCAGTGTGCCCAGTAGATTTTTCTTTTGGGGGTGACCACTTATGGGACAGGTTCAGTGTTTTTATTTTGTTCAGTAACGGGGCTATCTATGTACTTTGCCCAGTTGTGCCATTTGGAAGTCTCTTCAAATGTGAGTCTTTGGTAGAAATATACAATGATGCTCACACATTTGGAATAATATCAGCCAACTCTGTTGCTGCGAGTAATTCAAAGTTGGCAATTTCCTGGTTAGAAGCATCATTTCCCGAGTTACAGAACCAAGATGCTGAAGGAGACAGCCTGTCCTTGCTAAGAGCTCATGCATATTCTTTGTTTGATGCATCTCTTGTCTTGCAGGGACCTCTGCAAAGAGTAGGTCAGGATGGAAATGGAGATTCGGTAGGTTGTAGCACAGAATGTGAAGGTCGTGCAGTTAGTTTTCTCTACAATTTAGTCAGCAAAGACTCAATTTTGGTGACTGCCTGGAGTGGTGGGCAATTGCAAATAGATGCTCTTGCCGATGAGATCCAACCTGTCTGGTGTGTTGGTAGTCCGCCTCGTCTCCGTGTTGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAGTCAATTACCTGCAGCAGTCTGGGGAAGGTTGATCATAATGCCTGGTTGGGTAATCCACCCCCTTTGCTGAGACTGGCTATTGTTGATTTGGCTCTGCCACGAAGAGCAGAAAGTGGTTATAATATTTCTTTGTTCATTGATATGCTTATGCCAGAAAGAATATTTTCCCTTCATGATGGAGGGATTGACTCGATAGTTTTACATTTTCTTCCTTTTACAAGTCAGTCAAATGGCAAGGATGATACAATGAAGACACCGTCTGTGCACCCTGTGTTAAATACTTGTCAGAGTGGATATACCTCAGAACCCTCATTTTGTGGCTTTGTGTCTTTATCGGATTCATTTGGATATTCATGGATTGTAGCTATTACACTTTCTCTTGAGTGTGTTGTGCTTGAGATGAAAAGTTGGAATCTCTTGCTTCCTGTAAGCATTGATATGGAGAAGAAACCCATTTCATCAGAGGGGGAATCAAAGGAGAGGGTTATACCAACAATAATTAGCAAAGAACTACTTAGTGGACCGAAGGAGGTACTTGTTCCCCATGCCTCTCCAAGTTTGCGTTCTGTTGCAGCTGATTCAATTGAAGGTCGATCAACATTACATCAGTATTTCAAGCTGTTTCATGAAACTTATGTGGAGTATGGACATAAGGTGTACCTGGAGCTCAAGCATCACGCACCTCAGTTGAATAAAATCATTAACGACCAACATTCTCGCTTAGGCGAAGCACAGCAGAAACTTTTGAACGTTGAGAAGAAAGAGGCTATATTGCAGAAAAGGTTAGGTCGTGCTATTCAAATGCACAATTCTCTGGAAGAGCGCTTGCAACAATTAAGGAACTTACCTTGTGCTCACAAAAAACCGCTGTCCAGAGCAGAGCGGCAGTTTAAATCGGAGCTTGACCGCTTTAAGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGATGCGGTAAGTGCAAGGCTGAGAAGGCACTTGCAAGCTTCGAAAGCTAATCAGCAACAGAAAACAGCTGGGAAGAAAATTCATGCTGTAGACAGTAAGATATCCATGCTCAAATCGTCTCTTGAAAAACTCTCACTTGTAAATACTGAGAATTCAAAGAAAGTAAAACTCGTGGAGTCTACATTGAGAAACAAAGAAAGAAGTAGCGGCAGAGAATCAAGCCTGCCTTTGCCCTAA 2406 0.4497 MRITLEPSSEPSPSRSQTPKDEVEWVPLAKHPLFTAHGGAAVSGYRNLLAWDGASRLYFWDTNSRILHRLSLRLGDPDPSSVLASSPSKVLQADAELDFDVHKISVNRNGTAILLFGSETLSVMYLYGRASKKDVNLICRTITVGSQTYSTGGNNIRVLQALWHPYSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPVEPGRFRNASSVCPVDFSFGGDHLWDRFSVFILFSNGAIYVLCPVVPFGSLFKCESLVEIYNDAHTFGIISANSVAASNSKLAISWLEASFPELQNQDAEGDSLSLLRAHAYSLFDASLVLQGPLQRVGQDGNGDSVGCSTECEGRAVSFLYNLVSKDSILVTAWSGGQLQIDALADEIQPVWCVGSPPRLRVDSHDQILGLAMICESITCSSLGKVDHNAWLGNPPPLLRLAIVDLALPRRAESGYNISLFIDMLMPERIFSLHDGGIDSIVLHFLPFTSQSNGKDDTMKTPSVHPVLNTCQSGYTSEPSFCGFVSLSDSFGYSWIVAITLSLECVVLEMKSWNLLLPVSIDMEKKPISSEGESKERVIPTIISKELLSGPKEVLVPHASPSLRSVAADSIEGRSTLHQYFKLFHETYVEYGHKVYLELKHHAPQLNKIINDQHSRLGEAQQKLLNVEKKEAILQKRLGRAIQMHNSLEERLQQLRNLPCAHKKPLSRAERQFKSELDRFKEVELDALHSSVDAVSARLRRHLQASKANQQQKTAGKKIHAVDSKISMLKSSLEKLSLVNTENSKKVKLVESTLRNKERSSGRESSLPLP* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1217 801 MobiDBLite consensus disorder prediction 1 19 - -
Vra3g1217 801 PANTHER NUCLEOPORIN NUP84-RELATED 15 790 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Vra3g1217 801 Coils Coil 641 689 - -
Vra3g1217 801 MobiDBLite consensus disorder prediction 781 801 - -
Vra3g1217 801 Pfam Nuclear pore component 45 220 IPR019321 -
Vra3g1217 801 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1217 K14318 - gmx:100801853 1414.82