Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1215 ATGGCCTGGTTATGGCGCGCAGGTGCCAAGTTCTCTCTGGTTGCCTCCGCCGTTGGCGGCGGAGTCACCACGGCGCTCATTGCCACTTCCGACGACCCCGAGACGGCTCTCAAGCTTTGCGCCACCGTCCCACATCGCCTCTTCCGCGACGCGGTCACGGCTGCTAACATTGCTTTCGATTATGAATATTCACTGTGGGGACTGCCGGAAGGGAGTATTGAGAGGGAGAGAATCAAGCATGAAGTTCACCTCAGGTCAGCACAAAAGCTTCAAGACCTTTGTTTTAAGAATGGAGGGGTTTATATAAAGCTTGGGCAACATCTTGGGCAATTGGAATATGTTCAGACAATGAGGGAATCTATGCTAAATAAATGTCCAGTTTCTTCCTATGAGCAAGTATGCAACGTATTCAAGAAAGAGCTTGGTGATACTCCAGATAAAATATTTTCTGAGTTTGATCCGGTTCCAATAGCAAGTGCTTCCCTTGCACAAGTTCATGTAGCTCGCATGCATGATGGACAAAAAGTTGCTGTCAAGGTTCAGCATACTCACATGACTGATACAGCAGCTGCTGATCATGCCACTGTGGAATTGGTTGTAAACACATTACACAGATTTTTTCCCAGTTTTGATTATAGGTGGTTGATTGATGAGATTAGCGAAAGTTTGCCCAAGGAATTAGATTTTTTAACTGAGGCAAAGAACAGTGAGAGGTGTCTGGGTAACTTCCACAAATTGTCTCCTCATATTGCAAATTATGTATATGCACCAAAAGTATATTGGAACCTGAGTACCTCGAAGCTGCTGACAATGGAATTCATGGACGGTGCTTATGTAAATGATGTAAAAACCATTCAGAAACTTGGGATCAACTTGCATGAACTTTCAACATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCATGGGTTTGTGCATTGTGATCCTCATGCTGCTAACTTGTTGGTGCGCCCATTGCCTTCCAGTAAAGCTAGCATTTGGGGCAGGAGAAAACCACAATTGATCCTTTTAGACCATGGACTCTATAAAGAGCTTGACTTCCAAACAAGAACTAACTATGCTTCACTATGGAAGGGGTTGGTATTTGCTGATGCTAATGCAATCAAAGAATATAGTGCAAAGTTGGGAGCTGGGGAGGATTTATATGCACTCTTTGCTGGAGTTCTAACGATGAGGCCGTGGAATAGAGTTGTGGACCCATCTATGGATCATTTAGTTATACAGGGAAATGAGAGTGAACGATTAGAATTGCAGATGTACGCATCTCAATATTTCCATCAAATCTCTGAGCTTTTAAGACGATTACCGCGTGTGATTCTGCTAATGCTAAAGACAAATGATTGTTTACGAGCGGTCAATAATTCTCTGTTACAGGGATCATCTTTGGAGACTTTTTTTATCATTGGAAAGGTTTCTTCGGAGGCTGTCATTGAAGCAAAGATGTTGAAAAGCAAATCACTTTTAACATGGTTAAACGTTAAATTGGATAAGATTTTGCTAGAAGTACGACTCTGGGGGATGCAGGTGGCCTTGTGGCTTTTACAACTAAGAAAGGCTTTGTCTTGGTCTAACCAACCATTTTAG 1608 0.4272 MAWLWRAGAKFSLVASAVGGGVTTALIATSDDPETALKLCATVPHRLFRDAVTAANIAFDYEYSLWGLPEGSIERERIKHEVHLRSAQKLQDLCFKNGGVYIKLGQHLGQLEYVQTMRESMLNKCPVSSYEQVCNVFKKELGDTPDKIFSEFDPVPIASASLAQVHVARMHDGQKVAVKVQHTHMTDTAAADHATVELVVNTLHRFFPSFDYRWLIDEISESLPKELDFLTEAKNSERCLGNFHKLSPHIANYVYAPKVYWNLSTSKLLTMEFMDGAYVNDVKTIQKLGINLHELSTLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSSKASIWGRRKPQLILLDHGLYKELDFQTRTNYASLWKGLVFADANAIKEYSAKLGAGEDLYALFAGVLTMRPWNRVVDPSMDHLVIQGNESERLELQMYASQYFHQISELLRRLPRVILLMLKTNDCLRAVNNSLLQGSSLETFFIIGKVSSEAVIEAKMLKSKSLLTWLNVKLDKILLEVRLWGMQVALWLLQLRKALSWSNQPF* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1215 535 PANTHER ABC1 FAMILY PROTEIN 8 526 - -
Vra3g1215 535 Pfam ABC1 atypical kinase-like domain 121 379 IPR004147 -
Vra3g1215 535 PANTHER BNAC04G05270D PROTEIN 8 526 - -
Vra3g1215 535 CDD ADCK1-like 120 384 IPR045307 -
Vra3g1215 535 SUPERFAMILY Protein kinase-like (PK-like) 126 325 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1215 Vra-Chr3 12893714 12899789 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1215 K08869 - gmx:100796182 1017.68