Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1192 ATGAGCTTTGCTGCGCCATCACTTGGTTCTGTTGGTGGTAGATCTGCTGGAAGAGCATTTGAGTTTGGAAGAACCTATGTTGTCAGGCCTAAAGGGAAACACCAAGCAACTATAGTTTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTTCTAGAGACCCTTCCTATTACAAATATTAAATGGATATGTCCAACTGCTCCTACTCGGCCAATATCTATTTTTGGTGGCTTTCCATCTACTGCATGGTTTGATGTTGGAGAGATTTCAGAAGATGCTCCCGATGATCTTGAAGGATTGGATGCTTCAGCTGCGCATGTTGCAAATTTGTTGTCTACGGAGCCTGCAGAAATTAAGCTTGGTGTGGGAGGGTTCAGCATGGGAGCTGCTACTGCCCTGTACTCCGCGTCCTGCTTTACTGCTGGGAAATATGGAAATGGGACTGCTTATCCTGCCAACCTAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGCAACAGGTTACAAGGGATAGATGAAGCTAGAAGGCGTGCTCAATCCTTTCCTGTTTTACTGTGTCATGGAAAAGGTGATGATGTTGTTCCCTATAAGTTTGGTGAGAAGTCATCGGAGTGCTTAAATTCAACTGGATTTGGGGATGTAACTTTTAAAGCTTATAATGGGCTCGGACACTACACAATTCCTGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGGGCCTTGAAGGGAAAACAGCGTAG 777 0.4569 MSFAAPSLGSVGGRSAGRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPITNIKWICPTAPTRPISIFGGFPSTAWFDVGEISEDAPDDLEGLDASAAHVANLLSTEPAEIKLGVGGFSMGAATALYSASCFTAGKYGNGTAYPANLSAAVGLSGWLPCSKTLSNRLQGIDEARRRAQSFPVLLCHGKGDDVVPYKFGEKSSECLNSTGFGDVTFKAYNGLGHYTIPEEMDEVCAWLTSKLGLEGKTA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1192 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Vra3g1192 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Vra3g1192 258 Pfam Phospholipase/Carboxylesterase 26 247 IPR003140 GO:0016787
Vra3g1192 258 SUPERFAMILY alpha/beta-Hydrolases 26 251 IPR029058 -
Vra3g1192 258 Gene3D alpha/beta hydrolase 18 252 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1192 Vra-Chr3 12682349 12690408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1192 1 255 Acyl Lipid Metabolism Gene Families AT5G20060 72.157 2.84e-140 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1192 K06130 - gmx:100796190 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1192 3 12682349 12690408 Vra3g1192 3 12682349 12690408 ECH