Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1189 ATGGCCAAAGGAAATTCTCCTCTCCTCAGACCTACCATCGCCAAACGATCTTCTCATCAGAGTGTGTTAGCCGGAGCAAAGGCAGCAGTTGTTGCATGTGTTGCCACCGCCATTCCAACTCTGGCTAGTGTGAGGATGTTGCCTTGGGCAAAAGCCAATCTCAATCACACAGCTCAAGCTCTCATAATCTCCACAGCGACGGCAGCGGCATATTTCATAGTAGCTGACAAGACAGTTTTAGCAACGGCAAGAAAGAACTCCTTCAACCCACCCTCCCATTCTCAACCATGA 291 0.4948 MAKGNSPLLRPTIAKRSSHQSVLAGAKAAVVACVATAIPTLASVRMLPWAKANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNPPSHSQP* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1189 96 Pfam Early nodulin 93 ENOD93 protein 13 87 IPR005050 -
Vra3g1189 96 PANTHER EARLY NODULIN-93 13 93 IPR005050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1189 Vra-Chr3 12623945 12624756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1189 - - gmx:547773 142.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2225 7 42289008 42289896 Vra3g1189 3 12623945 12624756 PCT