Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1187 ATGGTGTCTCCAAAGCAGCTCCTAGGCACCATCGAATCAGCGCTTCTCGGCGCCTCGTCTCCGACGGCGGCGCAACGCGTAGAACTTTTGCACGCTCTTCGCACTTCGGTCATCTCTTTCCAGTCCCTTCTCTCCTATCCACCCCCAAAACCCTCTGATCGAAGCCAAGTTCAGTCAAAGTCCATCAGGCTGCCTGATTCTCCTCCTATTTCACTTGACGACCAGGATGTGCACATTGCGCTCAAGTTGAGTGATGATCTCCATCTCAATGAAGTAGATTGTGTTCGTTTGCTTGTATCAGCTAATCAAGAGTGGGGATTAATGGGAAGGGAACCACTGGAAATTTTACGGCTTGCAGCAGGACTCTGGTATACAGAGAGAAGAGATTTGATAACATCCCTCCATTTGCTCTTAAGGGCTGTGGTGCTAGATCAGGGACTGCAAGATGATATATTGGTAGACATTCAGAAGTATCTAGAAGATCTTATCAGTTCAGGACTTAGGCAGCGGTTAATTTCTCTTATCAAGGAACTCAATAGAGAAGAACCTTCTGGTTTGGGTGGTCTTCAGTGTGAGCGCTTTATTATTGATTCAAGAGGTTCTGTTGTGGAGAGGCAGGCAGTGGTCTCTAGAGAAAGACTTATTCTTGGGCATTGTCTTGTCCTTTCAATTCTGGTTGTTCGGACAAGTCCAAAGGATATAAAAGATATTTTTTCTGTTTTGAAAGATAATGCTTCTGAAGTTAGTGAGAGCAATACCATTGTCAAACATCAGATTACCTTTTGTCTTCTCTTTGCCCTTGTGGTTGCGTTTGTTTCAGATGGTTTGAGTACAGTGCCTGATAAAGCATCTGTCCTTTCTTCTAATACTTCCTTCAAACACGAATTTCACGAGCTTGTAATGGCTGCTGGAAATGATCCAATTGTTGAGGGATTTGTTGGTGGCGTAAGGCTTGCTTGGGCGGTATATTTAATGTTAATACAAGATGGTGCTGTAACAAGAGAGACTATTTCAAGTGGGTCATCAAACGAACTGGGTTATCTTAGTCAATGCTTGGAAGTCATTTTCTCAAATAATGTTTTTCAGTTTTTACTTGATAAAGTTCTTCGTACTGCTGCTTACCAGACGGAGGATGAAGATATGGTCTACATGTACAATGCTTATCTGCACAAACTGATTACCTGCTTTTTGTCTAACCCTCTAGCAAGAGACAAGATAAAAGAAACGAAGGAGCGATCTATGAGTGTGCTTAGCACATACCGAGTTGTTGGATCTCATGATTTTGCACAAGACACTAATTCAAGTTCTCTTCATGGCCCTTTGCCATTTAATTCAATCTTGGACTTCGTGAGCGATATTTATCAGAAAGAACCAGAACTCTTGTCTGGCAATGATGTATTGTGGACATTTGCAAATTTTGCTGGAGAGGACCATACAAATTTCCACACGCTTGTGGCATTCTTGAATATGCTGAGCACCTTGGCTTGCAGTCAAGAAGGTGCTTCAAAGGTTTATGAGTTGCTGCAAGGTAAAGCATTTCGCTCAATTGGATGGAGCACTTTATTTGAATGCTTAACAATTTATGACGAGAAATTCAAACAATCTCTTCAAACTGCTGGAGCTATGTGGCCTGAAATTCAGGAGGGGGATGCTAAAGCACTTGTGGCATACTTAAATGTTCTGAAGAAGGTTGTAGAAAACGGGAATCCAACAGAAAGGAGAACCTGGTTTCCTGATATTGAACCACTATTTAAGCTTCTTAGTTACGAAAATGTGCCTCCTTATCTTAAGGGTGCTCTGAGGAATGCAATAACCACTTTTATTCAGGTTTCTCCAATACTGAAAGACAGCATCTGGACCTACCTTGAGCAATATGATCTGCCAGTAGTTGTTGGGCCTGATATCCAGAATAGTCCACAATCTATGGGTACTCAGGTTTATGACATGCGATTTGAATTGAATGAAATTGAAGCAAGGAGAGAACAATATCCTTCAACAATATCTTTCCTTAATTTGATAAATGCTCTTATTGCAGAAGAAAGTGATTTGTCTGACAGAGGGAGAAGATTTATTGGAATCTTTAGGTTCATCTATGATCATGTTTTTGGGCCATTTCCTCAAAGAGCCTATGCAGATCCTTGCGAAAAGTGGCAGTTGGTGGGTGCCTGCCTTAAACATTTTCACATGGTTTTGAGCATGTATGGCATCAAGGATGAGGACTATGAGGGTGTAGTTGATCAGTCACGACTTACAACATCTAAAGAATCATCACCACTTCAGACGCAGCTCCCAGTCCTAGAGTTGCTCAAAGATTTCATGAGTGGAAAAACTGCCTTTCGGAACATAATGAGTATTCTTCTTCCAGGGGTGAATTCTGTTATTGCTGAACGCAGCAGTCAATTATATGGGAAGCTTTTAGAGAATGCAGTGCAGCTTTCCCTTGAAATTATAATCCTTGTCTTTGACAAGGATTTACTTCTTTCTGATTATTGGCTTCCTCTATACCAGCCATTGGACATTATACTCTCCCATGATAATAATCAAATAGTGGCCCTGTTGGAGTATGTCAGATATGATTTTCAGCCAAAAGTTCAACAATCCTCCATCAAAATCATGAGTATTTTAAGCTCCCGTATGGTTGGGCTTGTTCAACTATTGCTAAAATGCAATGCTTCAAACAGCTTGATAGAAGATTATGCAGCGTGCCTTGAGTTACGGTCAGAAGAGTTTCAAAATCTTGAAAATAGCAGTGATGATCCAGGCATTCTTATTATGCAACTTCTAATTGACAATATCAGCCGGCCAGCTCCAAATATCACTCATTTGCTACTTAAATTTGATCTAGATACACCAATCGAACGAACAGTTTTACAGCCTAAATTTTATTACAGTTGCTTGAAGGTTATTCTTGATATTCTGGAGGAGCTTTTGAAGCCTGATGTTAATGCATTACTTCACGAGTTTTGCTTTCAGCTCCTTTATGAATTGTGTGTAGATCCAGTAACATGTGTACCAACAATGGATCTGTTGTCAAATAAAAAGTACCAATTCTTTGTTAAGCACCTTGATACAATTGGGGTAGCTCCGCTTCCTAAAAGGAATAATAATCAGTCGCTTCGTAACAGTTCACTTCATCAGAGAGCATGGCTCTTGAAACTCTTAGCTGTTGAACTACACGCTGGTGATGTTAGTAGCTCCAATCATAGAGAAGCATGTCAGACAATCCTCTCTTATCTTTTTTCACATGGTATCAACGAAGTTGGTGGGGCCCAGACCATGTATCCATTTTTGCGACATGATACTTCTCAAAATGCTGTTCTAGGAACTGTCAGCAAGAGTAAGGTATTTGAATTGCTTGAAATAATCCAGTTTAGATGTCCAGATTCCACTTCTCAGCTCTCAGATATTGTGGCTGGAATGAAATATGACTTGCCGGCGGAAGACATACTTGGAAATTCTGGAAAGGATGGTGTGTACTATTATTCTGAGAGAGGTGATCGGCTAATTGACCTGGCCGCTTTCCACGACAAACTTTGGCAGAAATACAATTCAGCTTACTCCCAGGCAAGCAACATTGGAAATGAAGTTGAGCTAAATAATGTTCGTGAGACAATTCAACAGTTGCTTAGATGGGGTTGGAAATACAATAAAAATCTTGAGGAACAAGCTGCACAACTTCATATGTTGACAGCCTGGTCTCAGATTGTTGAGGTGTCTGCTTCTAGAAGATTAATAATGATCGAAGATCGAACTGAAATTCTTTTCCAGGTCCTTGATGCGTCTCTTAGTGCTTCTGCTTCTCAGGATTGTTCATTGAAGATGGCATTCATACTGTCCCAGGTAGCATTGACATGCATGGCTAAGCTGCGAGATGAAAGATTTTTGTTCCCTGGTAGTCTTAGTTCTGATAATATTACGTGCCTTGATCTCATTGTGGTGAAGCAATTATCCAACGGTGCTTGTCTTACTATATTGTTTAAGCTTATTATGGCAATTCTTAGAAATGAATCTTCTGAAGCCCTTAGGAGACGTCAATATGCTTTCCTTCTTAGCTATTTCCAGTATTGTCAAAATGTGGTTGATCCTGATGTTCCATCAACAGTTCTTCAATTCTTGCTGCTCAATGAACAAGACAATGAATATATTGATCTCCCAAAGATTGACAATGAACAAGCAGAACTGGCTCATGCAAACTTTTCAACTTTGAGGAAAGAAGCTCAGAGCATTTTGAATCTGGTCATAAAAGATGCTACGCATGGTAGTGAGCCTGGAAAGACAATATCACTGTATGTTCTTGATGCACTGATTAGTATAGATCATGAGCGCTATTTTTTGAGCCAACTTCAGAGCAGGGGATTTTTAAGGTCTTGCTTTACAGCCATAAGCAATGTTTGCAATCAGGATGGCGGCAGTCTTTCACTGGACTCTTTACAGAGGGCATGCACTTTTGAGGCTGAACTTGCTTTACTACTAAGAATCAGCCACAAGTATGGGAAGTCTGGAGCACAGGTACTGTTTTCCATGGGCATATTGGAGCATCTTTCATCTGGCAAGGCAATCAATTTACAGGGAAGTTTAAGGTGGATTGAGACAAGACATAGAAGAGATGTGACTGTGGATGTTGATAGACAACGGATGATTATAACTCCAGTCATGAGATTAGTGTTTTCACTAACTTCCTTGGTTGATACATCTGACTTTTTGGAGGTGAAGAATAAAATTGTTCGTGAGGTAATTGATTTTGTCAAAGGGCATCAATCAGTCTTTGATCAGGTTCTCCGTTTAGATATTGCTGAAGCAGATGAGCTAAGAATGGAGCAGATCAATTTAGTTGTTGGTATTCTTAGCAAGGTTTGGCCTTACGAAGAGAGTGACGGTTATGGTTTTGTTCAAGGGCTTTTTGGTATGATGCGTGCTCTTTTCTCACATGATTCAAAGGTTCCTAGTTTTGCTCAATCAAGATTATCGCCTGAGAATCAGAGGAGTTCAGAACTACGGATGTTTAATTTGTGCTACAGCCTGAGCTCGTACTTGTATTTTCTAGTCATAAAGAAATCCCTGAGATTGCAGGTTTCAGATGCCTCGTCCAGTTACCCTACTTCTGTTGAACTTCAACAACCTACATTGAGCTTGCTCAATTCCCTTCTTTCTTCTGTTACAACTGCTCTTGAAAGGGCAGCTGAGGAGAAATCCGTATTGCTGAATAAGATCCGAGACATAAATGAACTGTCAAGGCAGGAAGTGGACGAAATCATCAATATGTGTGTCCGGCAGGACACTGTTTCATCTTCAGATAACATACAGAAAAGGAGGTACATTGCAATGGTAGAAATGTGTCGAGTTGTTGCTAATAGGGATCAGCTAATCATTTTGTTGCTCCCACTCTCCGAACATATACTGAATATCATCCTTATCCATCTTCAAGAGAGTTCTGCTGCGCCTGATTCAACCTTGACAAAAGCAATTACATATGGTTCCAAGTATGATGCACAACAAGACGTTTCTTTGTTATGTGGAAAGTTAGTCCCAACCCTTGAGCGACTTGAGTTGCTGGGTGAGGATAAAGTAGGGCACAATCTCAAAGTATTCCGCAGACTAGCAACTTCTGCCAAAGAGCTTGCAATTCAAAAATTGATTTAA 5640 0.4066 MVSPKQLLGTIESALLGASSPTAAQRVELLHALRTSVISFQSLLSYPPPKPSDRSQVQSKSIRLPDSPPISLDDQDVHIALKLSDDLHLNEVDCVRLLVSANQEWGLMGREPLEILRLAAGLWYTERRDLITSLHLLLRAVVLDQGLQDDILVDIQKYLEDLISSGLRQRLISLIKELNREEPSGLGGLQCERFIIDSRGSVVERQAVVSRERLILGHCLVLSILVVRTSPKDIKDIFSVLKDNASEVSESNTIVKHQITFCLLFALVVAFVSDGLSTVPDKASVLSSNTSFKHEFHELVMAAGNDPIVEGFVGGVRLAWAVYLMLIQDGAVTRETISSGSSNELGYLSQCLEVIFSNNVFQFLLDKVLRTAAYQTEDEDMVYMYNAYLHKLITCFLSNPLARDKIKETKERSMSVLSTYRVVGSHDFAQDTNSSSLHGPLPFNSILDFVSDIYQKEPELLSGNDVLWTFANFAGEDHTNFHTLVAFLNMLSTLACSQEGASKVYELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMWPEIQEGDAKALVAYLNVLKKVVENGNPTERRTWFPDIEPLFKLLSYENVPPYLKGALRNAITTFIQVSPILKDSIWTYLEQYDLPVVVGPDIQNSPQSMGTQVYDMRFELNEIEARREQYPSTISFLNLINALIAEESDLSDRGRRFIGIFRFIYDHVFGPFPQRAYADPCEKWQLVGACLKHFHMVLSMYGIKDEDYEGVVDQSRLTTSKESSPLQTQLPVLELLKDFMSGKTAFRNIMSILLPGVNSVIAERSSQLYGKLLENAVQLSLEIIILVFDKDLLLSDYWLPLYQPLDIILSHDNNQIVALLEYVRYDFQPKVQQSSIKIMSILSSRMVGLVQLLLKCNASNSLIEDYAACLELRSEEFQNLENSSDDPGILIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFYYSCLKVILDILEELLKPDVNALLHEFCFQLLYELCVDPVTCVPTMDLLSNKKYQFFVKHLDTIGVAPLPKRNNNQSLRNSSLHQRAWLLKLLAVELHAGDVSSSNHREACQTILSYLFSHGINEVGGAQTMYPFLRHDTSQNAVLGTVSKSKVFELLEIIQFRCPDSTSQLSDIVAGMKYDLPAEDILGNSGKDGVYYYSERGDRLIDLAAFHDKLWQKYNSAYSQASNIGNEVELNNVRETIQQLLRWGWKYNKNLEEQAAQLHMLTAWSQIVEVSASRRLIMIEDRTEILFQVLDASLSASASQDCSLKMAFILSQVALTCMAKLRDERFLFPGSLSSDNITCLDLIVVKQLSNGACLTILFKLIMAILRNESSEALRRRQYAFLLSYFQYCQNVVDPDVPSTVLQFLLLNEQDNEYIDLPKIDNEQAELAHANFSTLRKEAQSILNLVIKDATHGSEPGKTISLYVLDALISIDHERYFLSQLQSRGFLRSCFTAISNVCNQDGGSLSLDSLQRACTFEAELALLLRISHKYGKSGAQVLFSMGILEHLSSGKAINLQGSLRWIETRHRRDVTVDVDRQRMIITPVMRLVFSLTSLVDTSDFLEVKNKIVREVIDFVKGHQSVFDQVLRLDIAEADELRMEQINLVVGILSKVWPYEESDGYGFVQGLFGMMRALFSHDSKVPSFAQSRLSPENQRSSELRMFNLCYSLSSYLYFLVIKKSLRLQVSDASSSYPTSVELQQPTLSLLNSLLSSVTTALERAAEEKSVLLNKIRDINELSRQEVDEIINMCVRQDTVSSSDNIQKRRYIAMVEMCRVVANRDQLIILLLPLSEHILNIILIHLQESSAAPDSTLTKAITYGSKYDAQQDVSLLCGKLVPTLERLELLGEDKVGHNLKVFRRLATSAKELAIQKLI* 1880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1187 1879 Coils Coil 1723 1743 - -
Vra3g1187 1879 MobiDBLite consensus disorder prediction 47 68 - -
Vra3g1187 1879 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 1688 - -
Vra3g1187 1879 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 1688 IPR021827 GO:0005643
Vra3g1187 1879 MobiDBLite consensus disorder prediction 47 65 - -
Vra3g1187 1879 Pfam Nuclear pore complex scaffold, nucleoporins 186/192/205 25 1616 IPR021827 GO:0005643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1187 K14310 - gmx:100777616 3315.78