Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1185 ATGGCACACTCTCTGAGTTTTGCTCCTTTTTCTTCCTTCAGAGCCTCGTGCAGACCAGCAGTTACTGGTAATTCGGTTGCCCCAAAGGCTTTTTGGATAAGCGAAGCCTGCCACAATTCTAAAGTTCGGAACTTTCAATCTTTGAAGGTTAAAGTAAGTGCTGATCTAATGCAGGCTACGGATGATAATAAACAAACCAAGGCAAAGAGTATCGTTTGTCCAGACTGTGAAGGAAATGGTGCAATATCATGCACTCAATGCAAAGGTACTGGAGTTAATTCTGTAGATCACTTCAATGGACAATTTAAAGCTGGTGGATTATGTTGGCTATGCAGGGGAAAAAGAGACATATTGTGTGGAAGCTGTAATGGAGCTGGCTTTCTTGGTGGATTCATGAGCACGTTTGATGATTAG 414 0.4227 MAHSLSFAPFSSFRASCRPAVTGNSVAPKAFWISEACHNSKVRNFQSLKVKVSADLMQATDDNKQTKAKSIVCPDCEGNGAISCTQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGSCNGAGFLGGFMSTFDD* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1185 137 PANTHER PROTEIN P13.9, PUTATIVE-RELATED 1 130 - -
Vra3g1185 137 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 1 130 - -
Vra3g1185 137 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 68 127 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1185 Vra-Chr3 12554328 12561701 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1185 - - vra:106757118 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1185 3 12554328 12561701 Vra3g1185 3 12554328 12561701 ECH