Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1179 ATGGAAGTGCAGAATAAATACATAGTGATAAAGCATCACATTGAAGATGCACCCAAAGAAGCCATCTTTGAGCTTAAAACTGGGACAATAGCTCTGTCCGTTGCGCCAGGTTCTGATGATATCATAGTCAAGAATCTCTACATTTCTATCGACCCTTACCAGATTAACCGCATGAAACTCTCTAGTTCCTCGCAGGGTACTTCAAGCTTTGCAGCACCCATAAATCCAGGCGAGGCCATTGATGGTGCTGTTATTGGAAAAGTTGTGGCTTCTGGGAATGCTAAGTTTCAGAAAGATGATTTGGTGCTTGGAGTATTCACATGGGCACAGTACAGTTTGGTGAAAGAAGGGAGTATCTTGAGAAAATTAGAGTCCTCTGAATTTCCACTATCATATTATCTTGGAGTTCTGGGATTCAACGGACTGTCAGCTTATGCGGGGTTTTTAGAATTGTGTAAACCCCAAAAGGGTGAAAAGGTTTTTATCTCTGCAGCTGGTGGAGCAGTTGGAAATGTAGTAGGCCAATATGCAAAGCTTTTAGGTTGCTATGTTGTTGGTTGTGCAGGTACCCAGAAAAAGGTGGAATTGCTTAAAAAAGAGCTAGGTTTTGACGAAGCATTCAACTACAAAGAAGAAAAAGATCTAAACTATGCTCTTAAAAGGTATTTTCCTGATGGGATTGACGTATATTTTGACAATGTTGGGGGTGAGACGCTGGAAGCAGCTGTGGCTAATATGAGGATATTTGGAAGAGTGGCTGTTTGTGGGGTAATATCAGAGTATAGTAGTGGTGGAAGAAAAGCTTCACCAAACATGTTGGACATTGTGTACAAGAGAATCAGCATCAGAGGATTTTTGGCTGCTGATTTTCTGAATGTTTTTGAAGATTTTTTGTCAAAAACTTCGGATTACCTTCGTACAGGAAAGTTAAAGACAATTGAAGACATTTCATCAGGCGTGGAGAGCATCCCTTCTGCTTTTGTTGGACTCTTCAAAGGGGATAACATTGGAAAGAAAGTTATAAGTTTAGCAGAAGAGTGA 1041 0.4054 MEVQNKYIVIKHHIEDAPKEAIFELKTGTIALSVAPGSDDIIVKNLYISIDPYQINRMKLSSSSQGTSSFAAPINPGEAIDGAVIGKVVASGNAKFQKDDLVLGVFTWAQYSLVKEGSILRKLESSEFPLSYYLGVLGFNGLSAYAGFLELCKPQKGEKVFISAAGGAVGNVVGQYAKLLGCYVVGCAGTQKKVELLKKELGFDEAFNYKEEKDLNYALKRYFPDGIDVYFDNVGGETLEAAVANMRIFGRVAVCGVISEYSSGGRKASPNMLDIVYKRISIRGFLAADFLNVFEDFLSKTSDYLRTGKLKTIEDISSGVESIPSAFVGLFKGDNIGKKVISLAEE* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1179 346 Pfam Zinc-binding dehydrogenase 168 296 IPR013149 -
Vra3g1179 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 309 IPR036291 -
Vra3g1179 346 PANTHER PROSTAGLANDIN REDUCTASE 2 344 IPR045010 GO:0016628
Vra3g1179 346 SMART PKS_ER_names_mod 28 341 IPR020843 GO:0016491
Vra3g1179 346 Gene3D - 8 341 - -
Vra3g1179 346 SUPERFAMILY GroES-like 3 153 IPR011032 -
Vra3g1179 346 Pfam N-terminal domain of oxidoreductase 6 117 IPR041694 -
Vra3g1179 346 Gene3D - 136 312 - -
Vra3g1179 346 PANTHER OS06G0602900 PROTEIN 2 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1179 Vra-Chr3 12503718 12506021 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1179 - - pvu:PHAVU_009G197800g 594.734