Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1165 ATGAACAAGGATAAGATCTTCAAGTTAGCAAAGGGGTTCAGGGGTAGAGCCAAGAATTGCATAAGGATTGCAAGGGAGAGAGTGGAGAAGGCCTTGCAATATTCTTACAGAGACCGTAGAAACAAAAAGAGAGACATGCGATCTCTTTGGATCCAAAGGATCAATGCTGGTACCCGTGTACATGGGGTCAATTATGGGAACTTTATGCATGGACTGATGAAGGAAAACATCCAACTTAACAGAAAGGTTCTATCAGAGTTATCTATGCATGAACCCTATAGCTTCAAGTCTTTGGTTGATGTATCGCGAAATGCATTTCCAGGAAACAAGAATGTTGTGATTCCTCCTAGAAAGGTCGCTTTTTAG 366 0.4153 MNKDKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRVHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKSLVDVSRNAFPGNKNVVIPPRKVAF* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1165 121 ProSitePatterns Ribosomal protein L20 signature. 43 59 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vra3g1165 121 Gene3D Ribosomal protein L20 45 106 IPR035566 -
Vra3g1165 121 Pfam Ribosomal protein L20 3 98 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vra3g1165 121 PANTHER 50S RIBOSOMAL PROTEIN L20 1 112 - -
Vra3g1165 121 SUPERFAMILY Ribosomal protein L20 2 105 IPR035566 -
Vra3g1165 121 Hamap 50S ribosomal protein L20 [rplT]. 1 104 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vra3g1165 121 PRINTS Ribosomal protein L20 signature 1 30 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vra3g1165 121 PRINTS Ribosomal protein L20 signature 31 60 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vra3g1165 121 PRINTS Ribosomal protein L20 signature 64 90 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vra3g1165 121 Gene3D - 1 44 - -
Vra3g1165 121 PANTHER 39S RIBOSOMAL PROTEIN L20 1 112 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vra3g1165 121 TIGRFAM rplT_bact: ribosomal protein bL20 3 102 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vra3g1165 121 CDD Ribosomal_L20 5 100 IPR005813 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1165 K02887 - gmx:100527387 245.743