Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1164 ATGTCGTTAGATGAAAGAACAAATCCACAAGCAGCAGCTGAACCTGTTCATGAAGATTTTATACCACCCTCCGATTGGGATCGCCAGGAAAATAGTGACACCCTCATTCTTATGCTTCCAGGGTTTAGAAAAGAACAATTGAAGGTTCAAGTGTCCTCTAACCGTGTGCTAAGGTTGAGAGGTGAAAGAAAGATCAGTGATAACAAATGGCGTAGATTTCATAAGGAAGTAAACCTTTCTGATTCTCATGACACCACTGGAATCAATGCCAAGTTTGAAGCTGGAATGCTATACGTAAAGCTTCCCAAACTCATCAAACCACCAATACCAACAAGTCCAACAACTGATGATGATCACAAACCAGATGCTACTGAACAACATGATCATGAAAAAGACTCAAAAGAGGACACAACTCATGAAGAATCCAAGATGGAGGAACAGCCAACAGCAGTTCATGAAGAGTCTCAAGTGATGCTGCAAAAGGAAAAGAGCAAAGCAGAAAGTGAAGACAAAAGTGAAGAAATGCAGGAAACTAAAGAAACAACAGTGAAGGAGCAGAAGGAAGGTGATGAAGATTCTGAAAAGAAGGTGGCAGAATCAGAAGTAAAAAGAGATAATGATGAGAAAGAGATGAGAGAAGTTGTAGCTTCAAAGGGTCTTGAAGGGTTAAGTAGGATTAGTGTGGGGAAGATGAAGACAAGGGTGGAGAAGATTTCTGAGATGGTTTTGGAGGTTAAGAAGCAGAATAAGGTAGCCAACTTAGTTGTTCTTGTCTTTCTTGTGTTGCTTATTGGAATCTACGTAAAGAGTGTGGTCAAGTCATCTTTTGCAGGACCCAAAAACCAAGACCTTTGA 855 0.4047 MSLDERTNPQAAAEPVHEDFIPPSDWDRQENSDTLILMLPGFRKEQLKVQVSSNRVLRLRGERKISDNKWRRFHKEVNLSDSHDTTGINAKFEAGMLYVKLPKLIKPPIPTSPTTDDDHKPDATEQHDHEKDSKEDTTHEESKMEEQPTAVHEESQVMLQKEKSKAESEDKSEEMQETKETTVKEQKEGDEDSEKKVAESEVKRDNDEKEMREVVASKGLEGLSRISVGKMKTRVEKISEMVLEVKKQNKVANLVVLVFLVLLIGIYVKSVVKSSFAGPKNQDL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1164 284 Pfam Hsp20/alpha crystallin family 28 107 IPR002068 -
Vra3g1164 284 PANTHER HEAT SHOCK PROTEIN 26 9 275 IPR045045 -
Vra3g1164 284 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 15 118 IPR002068 -
Vra3g1164 284 MobiDBLite consensus disorder prediction 107 210 - -
Vra3g1164 284 CDD ACD_sHsps-like 25 103 - -
Vra3g1164 284 SUPERFAMILY HSP20-like chaperones 17 104 IPR008978 -
Vra3g1164 284 Coils Coil 158 185 - -
Vra3g1164 284 MobiDBLite consensus disorder prediction 1 27 - -
Vra3g1164 284 MobiDBLite consensus disorder prediction 113 210 - -
Vra3g1164 284 Gene3D - 4 106 IPR008978 -
Vra3g1164 284 PANTHER OS03G0656000 PROTEIN 9 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1164 Vra-Chr3 12300265 12302113 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1164 - - vra:106757452 503.442