Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1160 ATGGCAGAAAGTATGAGGTGTTCTTCAATGATATCTCGTAGTAAAAGCGATCAAATAGCAATGAAGGAGACACTTCGTGCCCAGCAGCAACTTCTGGAAAAGCTATATGCTGAGTTGGATGAGGAAAGAGAAGCTTCAGCTACTGCAACGAGTGAAGCATTGGACATGATACTGCGTTTGCAGGGAGAGAAGGCTGTGGTGAAGATGGAGGCCAGTCACTACAAGAGAGTGGCAGAAGAGAAGATAGGCCATGCTGAGGCCTCTCTCGAGGCTTTTGAGGAACTTATGTATCAGAAGGAAATGTTAATTGTGTCTCTCGAATTTCAAGTCCAGGCTTATAGACACAAACTTATGAGCTTGGGGTGTGATCTTAGTACTAATGAGTTTGAGTTCCAAGAGGATCTCCTTCTGAATAGAAGTGATAAAAGAAATGGAGAAAATGGGGGTCAGAGTAGCACTGTTAGAAGGCTACATTCAATGCCTGCAATTCAGTTTCTAAGTTCCCTGAGAGCTGCTACCAGGGAAAGATCACCTAGTCCAGTTCTTGATGTGATTCCTAAGATAATAGAGGAGGAGAGTACTGACAAGGAAGTAGCTCAATCGGGCTTGGATTTGTCAAGAAAGGCAGTTGAATGTTCAGGTGGTAGTGGAACTCTTGATTCTTATTTGAACCAGATAAAGGAGTTGAATGAACAAGTGAAGATCATTTCAGATTGTGCTGAAGGAGAAAAGAGTGCAAATTTGAGTAGTAGAAGAGGGAGGTCCTATTCAGTTTTATCCCAGGCTAGCATTGATCAAGTTAGTCAAGGTGAAAGTACACATAATGGAGGAGTTGCTAATGATTCTCCTTGTTTGCATAATGTCTATGATGTATATGAAGTCCCACAAACTAGTGAAAAGCATGAGAAATGGAATTTGGATGCAGAGAACAGATTAAGAAAACCAGATTCTGAATATCAGGGAATGGTTGAAAAACCTGTTAAACTTGGCGCAGCAGAAAAGAGAAAGAGTATGTTTAAAGTGTATAGTGAAATAAAAACTCCTTTTCCTACACTTATGATGACAGGCAATGACCATAAAAAAGAAGGGATGAATGAAGTTTACAATTCTCAAGCTGAGTTTCGTAAGCTGAATCAGAGAATTGAGAGGCTTGAGAAGGAGAGAATTACTGCAAAGCAAGAGATTACCCGTGAAGGGAATGATGAAGAACAGTTGAGACTGTTAAAGGACATACAAAGTCAACTCCAATCAATACAATCAGAGATGAGAGACTTGAAATCCAAAAAAGCTGCTCCTAAGGACAACCTGTCTTTGGCTTCTCTCCAAGAGGCAATGTTGCACTTTTGGCTTTGA 1353 0.4072 MAESMRCSSMISRSKSDQIAMKETLRAQQQLLEKLYAELDEEREASATATSEALDMILRLQGEKAVVKMEASHYKRVAEEKIGHAEASLEAFEELMYQKEMLIVSLEFQVQAYRHKLMSLGCDLSTNEFEFQEDLLLNRSDKRNGENGGQSSTVRRLHSMPAIQFLSSLRAATRERSPSPVLDVIPKIIEEESTDKEVAQSGLDLSRKAVECSGGSGTLDSYLNQIKELNEQVKIISDCAEGEKSANLSSRRGRSYSVLSQASIDQVSQGESTHNGGVANDSPCLHNVYDVYEVPQTSEKHEKWNLDAENRLRKPDSEYQGMVEKPVKLGAAEKRKSMFKVYSEIKTPFPTLMMTGNDHKKEGMNEVYNSQAEFRKLNQRIERLEKERITAKQEITREGNDEEQLRLLKDIQSQLQSIQSEMRDLKSKKAAPKDNLSLASLQEAMLHFWL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1160 450 PANTHER BNAANNG28530D PROTEIN 9 443 - -
Vra3g1160 450 Coils Coil 75 95 - -
Vra3g1160 450 PANTHER OS08G0442350 PROTEIN 9 443 - -
Vra3g1160 450 Coils Coil 367 401 - -
Vra3g1160 450 Coils Coil 22 52 - -
Vra3g1160 450 ProSiteProfiles GTD-binding domain profile. 16 114 IPR007656 -
Vra3g1160 450 Coils Coil 408 428 - -
Vra3g1160 450 Pfam Zein-binding 20 110 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1160 Vra-Chr3 12242681 12245952 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1160 - - gmx:102665201 589.726