Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1140 ATGTCAATGCCACTGCTTGCACCTGAAAGTATGGAGGCTGAAGCATCGATTCCCTCAGATTCACTCCGGGCTCAGATTTCCAAATTTACTTCCTTTGCCGCTGAAGCTTACAAAAGAAAGCCAATCCATTATTGGATTTTTCTTGTTCTTGGCATCTTGGCAATGCTTGTGGCATTTCCTGCTTCCAGCATTGTGTCTCGTGTTTACTATGATAACGGTGGGCAGAGCAAGTGGATCATATCTTGGGTGGCTGTTGCTGGATGGCCCCTAACTGCCTTAATACTGTTTCCTACATACATTATCAGTAAAACCTTTCCTACCCCTCTGAACCTGAAACTCACTCTGTCTTATATCATTTTGGGTTTCTTAAGTGCTGCTGATAACCTCATGTATGCTTACGCCTATGCTTACCTCCCTGCATCTACTGCCTCACTCGTGGCATCATCATCGCTTGTGTTTTCTGCACTATTTGGATATTTTCTTGTGAAGAACAAAGTGAATGCTTCAATAGTAAATGCTGTTTTTATCATAACTGCTGCATTGACCATCATTGCCTTGGACTCAAGTTCAGACAAATATCCCAATATCAGTGACAGTGAATACATCATGGGATTTGTATGGGATGTTTTGGGATCTGCTCTTCATGGGCTTATTTTTGCCCTCTCAGAGCTGGTGTTTGTGAGGTTATTGGGAAGAAGATCCTTCATTGTGGTTTTGGAACAGCAAGTCATGGTTTCTCTATTTGCTTTTCTGTTTACCACTGTAGGGGTAATTGTGAGTGGTGATTTTCAGGGAATGGCACATGAGGCTACCACTTTCAAAGGTGGTAGAGCTGCTTATGTTCTTATTATTGTTTGGGGTGCAATCACTTTTCAGTTGGGGGTCTTGGGAGGCACTGCTGTTATTTTCTTGGGTTCTACTGTGCTAGCTGGTGTACTTAACGCAGTAAGAACACCCATAACAAGCATTGCAGCTGTTATTCTGCTGAATGATCCAATGAGTGGTTTCAAGATCCTCTCCCTAGTGATCACCATTTGGGGCTTTGGCTCATATATCTATGGCAGTTCTATGAGGGAAAAAAATCATGAGAGTGTAGCTACATATTCTAGTCCATAG 1116 0.4256 MSMPLLAPESMEAEASIPSDSLRAQISKFTSFAAEAYKRKPIHYWIFLVLGILAMLVAFPASSIVSRVYYDNGGQSKWIISWVAVAGWPLTALILFPTYIISKTFPTPLNLKLTLSYIILGFLSAADNLMYAYAYAYLPASTASLVASSSLVFSALFGYFLVKNKVNASIVNAVFIITAALTIIALDSSSDKYPNISDSEYIMGFVWDVLGSALHGLIFALSELVFVRLLGRRSFIVVLEQQVMVSLFAFLFTTVGVIVSGDFQGMAHEATTFKGGRAAYVLIIVWGAITFQLGVLGGTAVIFLGSTVLAGVLNAVRTPITSIAAVILLNDPMSGFKILSLVITIWGFGSYIYGSSMREKNHESVATYSSP* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1140 371 Pfam Purine nucleobase transmembrane transport 49 360 - -
Vra3g1140 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 91 189 - -
Vra3g1140 371 PANTHER PURINE PERMEASE 5-RELATED 13 364 - -
Vra3g1140 371 PANTHER OS09G0467300 PROTEIN-RELATED 13 364 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1140 Vra-Chr3 11997346 11999815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1140 1 348 Organic Solute Cotransporters AT2G24220 67.816 3.00e-150 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1140 - - pvu:PHAVU_009G194800g 636.721