Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1132 ATGGAAGACGACGACGAGTTCGGAGATTTATACACTGACGTTCTCCGCCCCTTCGCTTCGCCCTCATCCTCTGCGTCTCAACCGCATCAATCTTCTCCTGCGCCGTCTGCCATCGATCTCAACCTCAACCTAAACGCCGCTCAGATCCCCGGCGATGCGTCTGTCGATATTTCCCCTGCATCCAACCAGCTTCCTCCCTCCGACACGCAAGAACCGCCTCCCGCTGCAGCGGAGGAGCCGACCAAAATTCCCGACGCGGAACCTCAGCCGGATTCAAACCTCGCCAGTGCAGACGCGGGAATTGATCCGATCGATAGGGACGTGAAATTTGACATCGAGGAGGAGGATGACGGTGGCGATGGCTCGCCGGTTATTCCGGGCCTGGCCGGTGAGGCACCGGCTGAAGAAGGCGGGGAGGGAGATGATTGGGATACCGATAGCGAGGATGATTTGAAGATAGTGTTGAATGAGAACAACCACATGGCCATGGAACGGGGAGGGATGGGGGAGGGTGACGAGGAAGAGGAAGATGGGGATGAAGAACTTGTGATTGTGGCAGGTGGTGATCCGAATCAGAGTGTGGAGGAGCAGGAGTGGGGCGAGAATGCGGCCTTGGCTGCTGGGGACGGTGAGAGGAAGGATGCCGCTGGCGAATTGGCCAAGGCTGGGGGTGCTGTGGTGCCGAAGCTTGGGTATAGCAATCATGGATATCACCCCTTTCATTCCCAGTTTAAGTATCAGTATGTTAGGCCTGGTGCAACACTAATGCCTGGAGCTACTTCTTCTGCTCCAGGTGGGGCTCCTGGTCAGATTCGTCCACTTGCTAACATGGCTGGTCGAGGTAGAGGGGACTGGAGACCACCTGGACTAAAAGTGCCTGCTGCTATGCAAAAAGGTTTTCATGGAGGTCCTGGATTACCTGGTTGGGGCAGTGGTACTGCAGGGCGCGGTTTTGGTGGTGGATTGGAATTCACACTTCCCTCTCACAAGACTATATTTGATGTTGATATTGAGAATTTTGAGGACAAACCATGGAAATATCCAAATGTTGATACTTCAGATTTTTTCAACTTCGGTTTGAATGAGGAGAGCTGGAAAGATTATTGCAAACAGCTGGAGCAATTACGCTTGGAGTCTACAATGCAAAGCAAGATACGTGTTTATGAGAGTGGTCGAACAGAGCAGGAGTATGATCCAGACTTACCCCCTGAATTAGCTGCAGCTACTGGTATACACGATGTTCCTGTTGAAAATGCAAATTCTCAAAAGTCCGATGTCAGACAGAGTGATGTTATGAAAGGTTCTGGCACTGGACGTGTGCGACCACCACTAATTTCTTTCGCACAGCCAACTGGAAGAGCAATACAGGTGGAAGGTGGTTATGGGGACCGGCTTCCTTCTATTGATACCCGTCCTCCCCGAGTCCGTGATTCAGATGCAATCATTGAGATTGTTTTACAGGATACAGAAGATGACCATTCCTCTGCCGGATTTGCTCAAGATCCACCTGATGGTGGAGAACCCCATAGAGAGGATTTTAGAGAAGACCATGTGGCTGGAGACGAAATTCCGAGGTTGGAGCCAGAGTATTTTGATGGTTTCCCACAGGATTATAGTGGACGAAAGAAGGAGCTTCCAGGAAGAAGAATGCCATTTATAAATTCCAGTCCTGCAAACACGGCGAATGGGGATGAAAAATTGTCATTCCCACAGGAAGAACCAATTGAGTACTCTGGTTCTAGGGGCCAAAATCATAGGTCCTATGGTGGCAATTTTAGCTCCTCTCATGATGAAAGGAAGATGCAAAGAAGAGTGCGTGGTCAGTCTCCTCCTATTACTCCTATTCAAGAATTAGCAGCTGATAATAAAAAAGAAGAGTCGGTCGAAAGCATGGAAGGTAAACATAATACACTTTCATCCCCTGTCATTAAAGACGTACGGGAGTCCAGTATAGAAGACAAAGATACCGAACTTGAGGACACTGGGACAGCGGATGGAAGTTCCAAATTGGAAAAGGAGGAAACAGTAGACAAAGTAGAAACCCTTGAGGATGGGGTGGCAAAGAGACAGAAATTAACATCCCGAGTTGAGCAACATTTGCTGGATGATGTTGATGATTGGGAGGACTCAAAAGCTGCAAAAAGTAGTGATAACAGCAAAGCAAGATCAGCAAGCAGCAGGGATAACCATAAGCGGCGGGAAGGTTTTGAAGAAGAAGTAGTTCAGGATCCACGATCAGCACATCATAGTAGCATCAGACAGCACCCTGATGAAATTGAGCAAGGATTTTATAGAAGAGAGCATGATGCCAAGCAAGAACCTGAACGAAATCGCATGATAATTAAAGGTAGAGAGAGACCATACACTTACAAGGACCGGCATCTTAGCTTAGGTCCTCAGTTGCACACAAATACTGATGGATTTGATGGACAAAAAGAAAGGGACAATTCTGACATGGATTGGGCACGGAGAGATGATGATCTCTATAGCAGAAGGGTTAGAAATGATGAACCAAGAAAGCGGGATAGAGCTAAGGTTCGAGAAAATGAGAGAAATGACAAAGAAGATAATATTCATTCTAGAAAACTATTGGATAATGGTAGCTACAGGGTTTCGTATGAAAAGGATGTTGGTTATAGAGACTCAAGACATAGGGAAAGAGATGACGGCTTGAGGATGAGGTATGAAGGTGTGGAGGATTACCATGGCAAGAGGAGGAAGGATGAGGAATATCTTAGGAGGGAGCATATTGACAAAGAAGAAATTCTGCATGGCTACAGGGATAATGCTAGTCGGCGCAGGAGAGAAAGAGATGAATCTTTGGATCCACGAAAGAGGGATGACCTGCAAAGAACTAGAGATAACCCTGATGATCAATATGCTGCTAGGCAGAAAGATGAGGCATGGGTATTGAGGGAGAGGGGTGATAGGCAGAGAGATAGGGAGGATTGGCATAGGATGAAACAGTCCCATGAAGAACTCCTACCTAAGCGTGAGAGAGAAGAAGGGCGGAGTTCTGTAAGAAGTGGACGAGGAGCTGAAGAAAAAGCATGGGTTGGTCATGTTAGGGCTAAAGATGAACATAAACTTTCTGAGAAGGAATACCAATCCAGAGAAGCACTGCGTCACAATGATCAATTGAAGAGAAGGGACCGAGTTCAGGATGAAAGTCCACATCATAAGGGGCGTGACGATGTGTCTGTGCGTGGAAATCAGTATACTACTGAGGAAAGGCGATCTAGGCAGGAAAGGTCAAGTAGTCGTAGTGATCGTGTTGCTAATGCTTCAGATAACCAAAAAGTTAAGCATAGAGAAGGCTCAAGGAAAAGCAAAGAACGTGATGTTAGTGACCCTAATAGTTTAGGCGCGTCCAAGAGAAATCAAGAAAATCAAAGTGGTCCAACCAATGAGAAGGGCTTGAAAGGATCTGGTGACGAAGACCGTGCTGAGCATGATATTCTAGGGCACCACTCATCCAGAAAACAGCGGGAAGACATTTCCTCAGATGATGAACAGCTAGATTCTCGCCGAGGACGTTCTAAATTAGAACGCTGGACAAGCCATAAAGAAAGAGATTTCAGTATCAACAAATCCTCTTCTTCGTTGAAGTTCAAAGACATTGATAAGGATAATAATAACAAAAACGGTGGATCTTCTGAAGATGGGAAACCTGCGGATGATCCTGCTAAAACTGTTGATGTTAATAACCAACATGTCTTGTCGGCAGAAGCAAGGGATTCTGCAGATATGGAGAATAAGGATGCTGATACAAAAGAAATGGGAGATCGGCACCTTGATACAGTTGAGAGGTTGAAAAAGCGTAGCGAAAGGTTCAAGCTCCCTATGCCAAGTGAAAAAGAGGCCCTAGTCATCAAGAAGTTAGAAAGTGAACCACTCCCTTCTGCCAAAAGTGAAAATCCAGTAGATTCAGAAGTCAAACAAGAACGACCTGCCCGTAAAAGAAGATGGGTCACTAACTGA 3981 0.4667 MEDDDEFGDLYTDVLRPFASPSSSASQPHQSSPAPSAIDLNLNLNAAQIPGDASVDISPASNQLPPSDTQEPPPAAAEEPTKIPDAEPQPDSNLASADAGIDPIDRDVKFDIEEEDDGGDGSPVIPGLAGEAPAEEGGEGDDWDTDSEDDLKIVLNENNHMAMERGGMGEGDEEEEDGDEELVIVAGGDPNQSVEEQEWGENAALAAGDGERKDAAGELAKAGGAVVPKLGYSNHGYHPFHSQFKYQYVRPGATLMPGATSSAPGGAPGQIRPLANMAGRGRGDWRPPGLKVPAAMQKGFHGGPGLPGWGSGTAGRGFGGGLEFTLPSHKTIFDVDIENFEDKPWKYPNVDTSDFFNFGLNEESWKDYCKQLEQLRLESTMQSKIRVYESGRTEQEYDPDLPPELAAATGIHDVPVENANSQKSDVRQSDVMKGSGTGRVRPPLISFAQPTGRAIQVEGGYGDRLPSIDTRPPRVRDSDAIIEIVLQDTEDDHSSAGFAQDPPDGGEPHREDFREDHVAGDEIPRLEPEYFDGFPQDYSGRKKELPGRRMPFINSSPANTANGDEKLSFPQEEPIEYSGSRGQNHRSYGGNFSSSHDERKMQRRVRGQSPPITPIQELAADNKKEESVESMEGKHNTLSSPVIKDVRESSIEDKDTELEDTGTADGSSKLEKEETVDKVETLEDGVAKRQKLTSRVEQHLLDDVDDWEDSKAAKSSDNSKARSASSRDNHKRREGFEEEVVQDPRSAHHSSIRQHPDEIEQGFYRREHDAKQEPERNRMIIKGRERPYTYKDRHLSLGPQLHTNTDGFDGQKERDNSDMDWARRDDDLYSRRVRNDEPRKRDRAKVRENERNDKEDNIHSRKLLDNGSYRVSYEKDVGYRDSRHRERDDGLRMRYEGVEDYHGKRRKDEEYLRREHIDKEEILHGYRDNASRRRRERDESLDPRKRDDLQRTRDNPDDQYAARQKDEAWVLRERGDRQRDREDWHRMKQSHEELLPKREREEGRSSVRSGRGAEEKAWVGHVRAKDEHKLSEKEYQSREALRHNDQLKRRDRVQDESPHHKGRDDVSVRGNQYTTEERRSRQERSSSRSDRVANASDNQKVKHREGSRKSKERDVSDPNSLGASKRNQENQSGPTNEKGLKGSGDEDRAEHDILGHHSSRKQREDISSDDEQLDSRRGRSKLERWTSHKERDFSINKSSSSLKFKDIDKDNNNKNGGSSEDGKPADDPAKTVDVNNQHVLSAEARDSADMENKDADTKEMGDRHLDTVERLKKRSERFKLPMPSEKEALVIKKLESEPLPSAKSENPVDSEVKQERPARKRRWVTN* 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1132 1326 Pfam Fip1 motif 334 376 IPR007854 -
Vra3g1132 1326 PANTHER FIP1[V]-LIKE PROTEIN 1 1326 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 646 792 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 1120 1138 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 489 1263 - -
Vra3g1132 1326 PANTHER FIP1[III]-LIKE PROTEIN 1 1326 IPR044976 GO:0006397
Vra3g1132 1326 MobiDBLite consensus disorder prediction 577 591 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 1291 1326 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 807 863 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 1308 1326 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 1 147 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 874 1119 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 17 43 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 1140 1228 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 1244 1263 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 419 445 - -
Vra3g1132 1326 MobiDBLite consensus disorder prediction 504 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1132 Vra-Chr3 11884137 11896532 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1132 - - gmx:100799266 2032.68