Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1130 ATGGTAATCATGGTGCAGAAGCGTTCTTTTGATGCTGAGGAAATACTCGAGGGATCTTTCAAACACCCAAAACATGCAGGACCCAGCCATGAGCTCTTTTCATTATCAGAATCTGTCTTTCCCGATGATGATTATCATACCCAAATGCCAAAACCTTCGGAGGATGGCTGTACACAAGTTAGTAGTGAAGGTATTGAGAAGGTCGAAAGTGGAAGTTTTGGTGAACTTGCTATGGAGGCTGGGAACTCTGAAACAAGCTTTCCTGTTATAGATATTCCTGCTTCTTCATGGGCCACTAGTAGCACAGCTGATGATCTCCATCTAGAAACACCTTTACATCTTGCCCTTTTTCCAGAGTATTTTAGTCCAGAGCGACCAATAAGGACACTGACTCGCTATGAGGACATTTATTCCATACTTCTGGAACACTCTCCTCGCAAACCTGTATCTGTTGGAGCTAATCATCAAGCCGAAGTTCCAGCTTGGGATTTTTTAGGGGCCAGTAATAGATCAAATGCCTCAGCTTCTGTTTCAGATACAGACTTAACTGTTGGGGACAGGGATGAAACTGAGGAAAGACTGTTGGGGACCTGTGTCATTCCCTTGCCTCAGATGGAATTATCTAGCAATGACGATGAAGTTGGCAAGGGAAGAACCGAGTGTGACTGTGAAGATCAGGGATCCATGAGATGTGTTAGACAACATATTGCAGAAGAAAGAGATAAACTTATAAAATCCTTTGGGCCTGAGAAATTCACTGAATTGGGCTTCACTAACATGGGAGAACAAGTGGCAGAAAAATGGAGTGCTGAGGATGAGCAATTATTTCATGAGGTTGTTTTCAATAATCCAGCATCCCTTGACAAGAATTTCTGGAACTATCTTTCTATTGCTTTTCCTTCACGAACCAAAAAGGAAATAGTGAGTTACTACTTTAATGTCTTTATGCTTCGAAGGAGGGCAGAACAGAACAGGAATGACCTTTTAAACATTGACAGTGATAATGATGAATGGCAAGGTAGTGACAGCAATGATATTGCAACTCGAGAGGAAGATGAGGACTCTGTTGCCGAGTCCCCGGTATGTCAAGATGAGTCTTGTATGGCTGACTGCCTAGATAATGATTTGCAAACCTATGATGAGTATGCTGCTGATGAACCCTGTGAAGCTAATGAAACAGTGGATTTTATTACTAGTAGGAACATTGATGATGATTCCAAATACGATCCTATAGAAGAGATGCCTCATTCTGGTAGTACCCCTCTAATTCAACCTCAGGATCAACCTGTTTGGCAGGATTCGTGTGATGAAAAAGTTAAAGATGATTCATGCACTTCTTCCGACGCAGGAGTTGCCTCACGGCAGACTAAGGTGAATACTGAAAATGGGGATCATTGGTGTGGTAACTATAATGGAGTAAGCAATGGTTACAACCAAGGATATGTTTTGGAGCCTTGTGATGCAAAAGTGTGGGATACTGGCTTTGTGTCATGCTCTAAGAATAAGATTGACTTTTTACCAACATGCAACATGATAGAAGAGGTTTTTGGAGATGGACGAAGGCAAGACATGAGAAGAGCTTGA 1584 0.4205 MVIMVQKRSFDAEEILEGSFKHPKHAGPSHELFSLSESVFPDDDYHTQMPKPSEDGCTQVSSEGIEKVESGSFGELAMEAGNSETSFPVIDIPASSWATSSTADDLHLETPLHLALFPEYFSPERPIRTLTRYEDIYSILLEHSPRKPVSVGANHQAEVPAWDFLGASNRSNASASVSDTDLTVGDRDETEERLLGTCVIPLPQMELSSNDDEVGKGRTECDCEDQGSMRCVRQHIAEERDKLIKSFGPEKFTELGFTNMGEQVAEKWSAEDEQLFHEVVFNNPASLDKNFWNYLSIAFPSRTKKEIVSYYFNVFMLRRRAEQNRNDLLNIDSDNDEWQGSDSNDIATREEDEDSVAESPVCQDESCMADCLDNDLQTYDEYAADEPCEANETVDFITSRNIDDDSKYDPIEEMPHSGSTPLIQPQDQPVWQDSCDEKVKDDSCTSSDAGVASRQTKVNTENGDHWCGNYNGVSNGYNQGYVLEPCDAKVWDTGFVSCSKNKIDFLPTCNMIEEVFGDGRRQDMRRA* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1130 527 MobiDBLite consensus disorder prediction 330 360 - -
Vra3g1130 527 CDD SANT 267 315 IPR001005 -
Vra3g1130 527 PANTHER DNA BINDING PROTEIN 4 524 - -
Vra3g1130 527 PANTHER DNA BINDING PROTEIN 4 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1130 Vra-Chr3 11864545 11868331 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1130 - - gmx:100793553 915.605