Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1125 ATGGGAGGTGAGGAGAAGCGCCACCAGATGATGCAGAACCTCTTCGGCGACCAATCCGAGGAGGAGGAAGAGCTCGACGTCGATTCCGAGCACGAATCGAATCCCCAACTCAATTACCCCTCCGACGAGGGAGAGGGAATGGGGGAGCAAGAGGGAGAGGGCGAGGTGGAGGGCCAGGGGGAGGTGGAAGTCGAGAGCGACGGAGACGGAGAAGGAGAACACGATCGCGAAAGCGAGGGCGAGAGGGAGCAGAGTTCGCAAGAGGTGGAAGTTGGAGAGAGAGAGGAGAGTGAGGGAAGAGACTCGGATAGTGACGCCAAAGATGACGGGTATAGCCAGCGTGGCGTCACGAGTAAGCGCCGCGATGACGTCGTTGAGAGCGGATCTGAAAGGTCGGAGGAGAATCATTACGATCACCACGACGATGAGGAGGAAGAAGTCGACGAAGCTAGAAGCCCCAGTGTGTCGCCCAGAGATGAAAAAGAAGATGAGACTCGTGACTTGCATTCGGCCCCTGAAATTCGTGATGTATTTGGTGATTTTGATGATGATGAAGAAGAGGAAATGGGGTATGCTGTTCAGCAGGACATTGAACAAGATTCAAATAGATATCCTGTGGAGGAGGAAGGAAGCTATGGAAAGAACCTGAGACCAGAAGATATACTTGCTGATGAAGATCATCAGTATGATTCAGAGGAGGAAAACTTTGAGATAAAAACTAAAGAGAAGCCACTTGGCCCCCCTTTAGAATTGGAAGTTCCATTACGACCTCCTCCAGCTCGTCCGGACAAGATGAACATGATTAAAGTTTCCAATATTATGGGTGTTGACCCTAAACCATTTGATCCTAAAACATATGTGGAAGAGGATACTTTTGTAACTGATGAATCTGGAGCCAGAAAGCGAATAAGGTTGGAGAATAATATTGTACGTTGGAGGACTGCTAGAAATCCTGATGGCACAACATCTTATGAAAGCAATGCCCGCTTTGTGAGATGGTCCGATGGCAGCCTGCAGCTTTTAATTGGGAATGAAGTTCTTGACATATCAGTGCAAGATGCACAGCATGATCAAGCACATCTTTTCCTTAGACACGGAAAGGGAATCCTTCAATCACAAGGAAGGCTATTGAGGAAAATGAGGTTTATGCCATCTTCCTTGTCTTCAAATTCTCATCGGCTGTTGACTGCCCTTGTTGACTCAAGGCATAAGAAGGTTTACAAGGTTAAAAACTGCATTACCGACATTGATCCTGAGAGGGAAAAAGAGGAAAAAGAGAAGGCTGAAAGTCAAAATATTCGGGCTAATGTGCTTCTTAACCGAAAGCGTGAGAAGGTGAGCCGGAAGTATACTCCAGCTGTGGATAGGAGGCGACAACTTTCTCCTGGGTTTTTAGAGGATGCATTGGATGAGGAGGATGAAGCAGATTACTATGATTCTCGTAGATCTCAGCGCCGCTTTGAGGATGATTTGGAAGTGGAAGCCCGAGCAGAGAAACGAATTATGAATGCTAAAAAGTCACAGGGACCTAGAGACATCCCTCGCAAGTCTTCTTTCCCACCTGCTAAATCCTCCCGAAATCCAGTGGGTTACCAGGATGATGAGAGAGAGGAGTCTGAGTATGAAACCGAGGAAGAGGAAGATGAGAGGCCTCCTCCACGCAAGAGGGATGAGGATACTGAGCCAGAGTATGAGGACAATGAAGAAGAAGAAGATCACTATGAAGAGGCAGAACAAGTTAATGATGCCTCAGATGAGGAGGAAGAGGAGGAACCAAAGCAAAAGAGTAAGGAGTTTAGAGGCAGTGCCAAGAGGAAGGGATTTGAATCAGATGAGGAGTCTCCTCCAAGGAAAACAACCACCCATCGACGGATGGCAGTTGTGTATGATAGTGATGAGGAATAA 1905 0.4756 MGGEEKRHQMMQNLFGDQSEEEEELDVDSEHESNPQLNYPSDEGEGMGEQEGEGEVEGQGEVEVESDGDGEGEHDRESEGEREQSSQEVEVGEREESEGRDSDSDAKDDGYSQRGVTSKRRDDVVESGSERSEENHYDHHDDEEEEVDEARSPSVSPRDEKEDETRDLHSAPEIRDVFGDFDDDEEEEMGYAVQQDIEQDSNRYPVEEEGSYGKNLRPEDILADEDHQYDSEEENFEIKTKEKPLGPPLELEVPLRPPPARPDKMNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGARKRIRLENNIVRWRTARNPDGTTSYESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQAHLFLRHGKGILQSQGRLLRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNCITDIDPEREKEEKEKAESQNIRANVLLNRKREKVSRKYTPAVDRRRQLSPGFLEDALDEEDEADYYDSRRSQRRFEDDLEVEARAEKRIMNAKKSQGPRDIPRKSSFPPAKSSRNPVGYQDDEREESEYETEEEEDERPPPRKRDEDTEPEYEDNEEEEDHYEEAEQVNDASDEEEEEEPKQKSKEFRGSAKRKGFESDEESPPRKTTTHRRMAVVYDSDEE* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1125 634 MobiDBLite consensus disorder prediction 150 177 - -
Vra3g1125 634 MobiDBLite consensus disorder prediction 46 68 - -
Vra3g1125 634 MobiDBLite consensus disorder prediction 178 193 - -
Vra3g1125 634 MobiDBLite consensus disorder prediction 69 138 - -
Vra3g1125 634 MobiDBLite consensus disorder prediction 562 589 - -
Vra3g1125 634 MobiDBLite consensus disorder prediction 1 220 - -
Vra3g1125 634 PANTHER BNAANNG06810D PROTEIN 2 634 - -
Vra3g1125 634 MobiDBLite consensus disorder prediction 590 634 - -
Vra3g1125 634 Coils Coil 425 445 - -
Vra3g1125 634 Coils Coil 567 590 - -
Vra3g1125 634 MobiDBLite consensus disorder prediction 244 263 - -
Vra3g1125 634 MobiDBLite consensus disorder prediction 461 485 - -
Vra3g1125 634 Pfam Leo1-like protein 267 426 IPR007149 GO:0006368|GO:0016570|GO:0016593
Vra3g1125 634 MobiDBLite consensus disorder prediction 201 220 - -
Vra3g1125 634 MobiDBLite consensus disorder prediction 501 634 - -
Vra3g1125 634 PANTHER LEO1 PROTEIN 2 634 IPR007149 GO:0006368|GO:0016570|GO:0016593
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1125 Vra-Chr3 11765490 11770336 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1125 K15177 - gmx:100791454 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1125 3 11765490 11770336 Vra3g1125 3 11765490 11770336 ECH