Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1116 ATGGCTTATAAATCGTTAAGTTCTATCACTGTGTTGGATATTGAATCCCTTGGAATTGCGAAAGAAGATGCTATCACTCTTCACCAAAGTCTCACAGAAATCATCAAAAGTCATGGAGATGGCACCCCTGCCACGTGGCAACACATCAGCAGCAGCCTCCTCAACCCTGAGCTTCCCTTCTCCTTCCATCAGATGCTGTACTATGGTTGCTACAAGGATTTCGGTCCCGACCCACCCGCTTGGATACCAGACCCGAAAAGTGCTGCTTTGACAAATGTTTGGCAATTGCTAGAGAGGAGAGGGGAAGAGTTTCTGGGTTCGGCTTATAAGGACCCAATTACAAGCTTTGATGATTTCCTGAAGTTCTCAGTCTCAAACCCCGAGATATGTTGGAAATCTGTGTTTGATGAAATGAACATATCATTTTCCAAACCACCTGAATGCATCTTACGTGATAGCCCCACAGGGGAAGACCCATTATCACACCCAGGTGGTCAATGGCTTCCTGGAGCATCTATTAATCCAGCACAGAATTGCATAAATATAAATGGCAAAAGAGGTTTGAATGATACAGTAATAATATGGCGCGAAGAACAACATGATGATCTCCCTCTACAAAGGATGACACTCAAGGAACTGCGTGAAGAAGTATGGTTAGTTGCATATGCTCTCAATTCTCTGGATCTGGAGAAAGGATCTGCAATTGCAATTGATATGCCAATGAATGTGAAGTCTGTGGTTATCTACCTAGCTATTGTTCTTGCAGGTTATGTTGTTGTGTCAATTGCTGATAGTTTTGCTGCTAGTGAAATATCAAACAGGCTTAGAATATCAAAAGCAAAAGTCGTATTTACCCAGGATCTCATTATTCGTGGCGACAAAAGTATCCCCCTTTACAGGAGAGTTGTAGATGCAGAGTCACCTATGGCAATAGTTATCCCTACCAAAGGATCTGAATTTAGCATGAAACTGCGCAACAGTGATCTTTCTTGGCATTATTTTTTGGAGAAAGTCTATAGTCTCAAAGGCAAGGAATTCATAGCAACAGAACAACCTGTAGAAACATTTACAAACATTCTCTTTTCATCTGGAACAACTGGTGATCCAAAGGCAATTCCATGGACCAATATTACTCCTCTAAAAGCTGCTGCAGATGCATGGTTCAACATGGACATTCGTAAAGGTGATGTGGTTTGCTGGCCCACTAATCTCGGATGGATGATGGGGCCATGGCTAGTATATGCATCCTTGCTAAATGGAGCTTCGATGGCTTTATATGTTGGATCTCCTCTTGGGTCTGGCTTTGCCAAGTTCGTACAGGATGCTAAAGTAACAATGCTTGGTGTTATTCCAAGTATTGTCCGGAGTTGGAAAAGTGCAAATTCCACATCTGGATATGATTGGTCTTCTATCCGTTGCTTTGGCTCCTCTGGTGAAGCATCTAATGTAGATGAATACCTTTGGCTGATGGGGAGAGCTCTCTACAAGCCGGTCATTGAATATTGTGGTGGTACAGAAATTGGGGGTGGCTTTGTGTGTGGATCACTACTACAGTCTCAGGCATTAGCTGCTTTTAGTACGCCTGCTATTTGCTGCAGTTTGTATATTCTTGGTGATAATGGCCATCCTATTCCACAAAATGTTCCAGGAATAGGCGAGCTGGCTCTTGGTTCCCTCATGCTTGGGGCATCAAATACACTGCTGAATGCTGACCATTATGATGTCTATTTCAAAGGAATGCCTCTATTGAATGGAAAGGTTTTACGGAGGCATGGGGATGTATTTGAGCGTACAGCTAGAGGATACTATCATGCACATGGTCGTGCGGACGACACAATGAACCTTGGGGGAATCAAGGTGAGTTCGGTTGAGATTGAACGCATATGCAATGAAGTAGATAACAGTGTTCTGGAAACAGCTGCGATAGGAGTTCCACCTTCTGGTGGTGGACCTGAGTTGTTGACGATAGTTGTTGTATTCAAGGATGCAAATTTTGCAAAGCAAGATTTACACCAATTGAGGATATCTTTTAATTCAGCTCTCCAAAAGAAACTAAATCCACTGTTTCGGGTTTCTCAAGTTGTACCATTGCCATCTCTTCCAAGGACGGCATCCAACAAGGTCATGAGAAGGGTTTTGCGACAGCAGCTGACAGAAACTAACCAAAGTTCTAAAATATAA 2181 0.4292 MAYKSLSSITVLDIESLGIAKEDAITLHQSLTEIIKSHGDGTPATWQHISSSLLNPELPFSFHQMLYYGCYKDFGPDPPAWIPDPKSAALTNVWQLLERRGEEFLGSAYKDPITSFDDFLKFSVSNPEICWKSVFDEMNISFSKPPECILRDSPTGEDPLSHPGGQWLPGASINPAQNCININGKRGLNDTVIIWREEQHDDLPLQRMTLKELREEVWLVAYALNSLDLEKGSAIAIDMPMNVKSVVIYLAIVLAGYVVVSIADSFAASEISNRLRISKAKVVFTQDLIIRGDKSIPLYRRVVDAESPMAIVIPTKGSEFSMKLRNSDLSWHYFLEKVYSLKGKEFIATEQPVETFTNILFSSGTTGDPKAIPWTNITPLKAAADAWFNMDIRKGDVVCWPTNLGWMMGPWLVYASLLNGASMALYVGSPLGSGFAKFVQDAKVTMLGVIPSIVRSWKSANSTSGYDWSSIRCFGSSGEASNVDEYLWLMGRALYKPVIEYCGGTEIGGGFVCGSLLQSQALAAFSTPAICCSLYILGDNGHPIPQNVPGIGELALGSLMLGASNTLLNADHYDVYFKGMPLLNGKVLRRHGDVFERTARGYYHAHGRADDTMNLGGIKVSSVEIERICNEVDNSVLETAAIGVPPSGGGPELLTIVVVFKDANFAKQDLHQLRISFNSALQKKLNPLFRVSQVVPLPSLPRTASNKVMRRVLRQQLTETNQSSKI* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1116 726 SUPERFAMILY Acetyl-CoA synthetase-like 118 719 - -
Vra3g1116 726 ProSitePatterns Putative AMP-binding domain signature. 359 370 IPR020845 -
Vra3g1116 726 Gene3D - 611 726 IPR045851 -
Vra3g1116 726 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 726 - -
Vra3g1116 726 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 726 - -
Vra3g1116 726 Pfam AMP-binding enzyme 205 615 IPR000873 -
Vra3g1116 726 Gene3D - 103 610 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1116 Vra-Chr3 11588170 11602560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1116 1 589 Acyl Lipid Metabolism Gene Families AT5G23050 66.780 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1116 - - gmx:100779628 1326.61