Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1113 ATGGTTTTCTCTTCACTACGCAGATACTTCAGTATGAGGTCCCAAAGCTCCAAGGTTCAGACCTTGTATGACCACTGCAAAACCATCTTTTCACCCTCTGGATCACCCCCTCCGTCCTCCCAGGCTTTGCAGAAGCTCTCTTCGATTCTGGACACTGTTCAACCTGCTGATGTTGGCCTTAAAGAAGAAACTGCAGATGATGATCGAGGGCATGGCTTTTTTGGTGCTAATGTGCTTAATAGAGTAGCTCGATGGGCTCAACCAATAACGTATTTGGACATTCATGAATGTGATAGTTTTACGATGTGTATATTCTGTTTCCCAACTTCTTCTGTTATTCCACTCCATGATCATCCTGGGATGACTGTATTCAGCAAACTTCTATATGGCTCTTTGCATGTGAAAGCTTATGACTGGGTTGAGCCTCCCTTTGTCGTAGAAAGTAAAGGACCTGGATATCCTCAAGTTAGACTAGCAAAATTAGCAGTTGATAAGGTGTTGAGTGCACCGTGTGAAACATCAGTCTTATATCCCAAACACGGTGGAAATCTGCACTGTTTTACAGCGGTAACACCATGTGCGATGCTAGACATTCTCACTCCTCCTTATATTCAAGACGAAAGGAAGTGTACTTACTATCATGACTATCCTTATTCAGCTTTCACAGCTGGAAATGCACCTGTATGTGATGGGGAAGAGGAGGAATATGCTTGGCTTGCAGAGCTAGAATCACCTAGTGATCTTTATATGCGTCAGGGGGTATATGCTGGTCCAACTATTCAGCCCTAG 789 0.4385 MVFSSLRRYFSMRSQSSKVQTLYDHCKTIFSPSGSPPPSSQALQKLSSILDTVQPADVGLKEETADDDRGHGFFGANVLNRVARWAQPITYLDIHECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPFVVESKGPGYPQVRLAKLAVDKVLSAPCETSVLYPKHGGNLHCFTAVTPCAMLDILTPPYIQDERKCTYYHDYPYSAFTAGNAPVCDGEEEEYAWLAELESPSDLYMRQGVYAGPTIQP* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1113 262 PANTHER UNCHARACTERIZED 13 261 IPR012864 GO:0016702
Vra3g1113 262 CDD cupin_ADO 98 203 - -
Vra3g1113 262 PANTHER 2-AMINOETHANETHIOL DIOXYGENASE 13 261 - -
Vra3g1113 262 SUPERFAMILY RmlC-like cupins 16 217 IPR011051 -
Vra3g1113 262 Pfam PCO_ADO 49 260 IPR012864 GO:0016702
Vra3g1113 262 Gene3D Jelly Rolls 14 223 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1113 Vra-Chr3 11555639 11562772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1113 K23953 - gmx:100807889 489.574