Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1095 ATGATGTTGAAGGTTTTTCTCACTTTCTCTCTTCTTTTGGGGATTCTGCTGGTTGCTCAAGCACATGGAAAAGAAAAGGAGATCGGCTTCTATCAGCTCAAGAGAGGAGATTTGAAGCTGAATCTGACCAATTATGGTGCAACAGTTGTTTCTGTCATAGTTCCTGATAAACACGGGAATTTAGATGACATCACTCTTGGCTACGATGACATCGAGCAATACAAGAATGATTCATGGTACTTTGGAGCACTTATTGGACGTGTGGCAAATAGAATTGGACATGCACGGTTTACATTGGACAGGCATACCTACAAATTGCCTGCTAATGATCACGGAAACACACTCCATGGTGGTTTCACAGGGTTCAGTGATGTTATCTGGACAGTAAAAGGTCACAAGGAAGACAGTTACATAACATTTACCTATGACAGTCATGACAACGAACAAGGGTTCCCAGGAAGAGTTGAAGTAGCAGTGACATACATGCTGATTGGCAGAAACAAATATGCTGTGAAAATGATTGCTAAGCCAGTAGACAAAGCCACACCAGTGAACCTAGCACAACATACATACTGGAATTTGGGAGGGCAAAAGAGTGGTCATGACATTCTATCACACAAAGTTCAAATTTTTGGGTCAAAGATCACAGCAGTGGATGAGAATCTGATCCCCACAGGAATATTAGAATCTGTGAAGGGCAGCCCTTATGATTTCCTTAAAGCAAGGACAGTTGGAAGTAGAGTGAATGAACTTCCAGGGTTGTATGACATAAACTATGTGATTGATGGAGATAAGTCTAGGCATTTGCAGAAAGTGGTGACAGTGAGAGAAGATGTGTCTGGGAGGAAACTGGAGTTATGGTCAAACCAAGTTGGTCTGCAGTTCTATACTGGTGGCATGTTGAATGCTACAAAGGGTAAAGATGGAGCTGTTTATGATAAGCATGCTGGCATTGCCTTGGAGACACAGGGCTTACCTGATTCTCTCAATCATCCTAATTTTCCATCACAGATTGTTCATCCTGGTCAGACATACAAGCATTACATGCTCTACAGATTCACAGCTTGCTGCTAA 1074 0.4209 MMLKVFLTFSLLLGILLVAQAHGKEKEIGFYQLKRGDLKLNLTNYGATVVSVIVPDKHGNLDDITLGYDDIEQYKNDSWYFGALIGRVANRIGHARFTLDRHTYKLPANDHGNTLHGGFTGFSDVIWTVKGHKEDSYITFTYDSHDNEQGFPGRVEVAVTYMLIGRNKYAVKMIAKPVDKATPVNLAQHTYWNLGGQKSGHDILSHKVQIFGSKITAVDENLIPTGILESVKGSPYDFLKARTVGSRVNELPGLYDINYVIDGDKSRHLQKVVTVREDVSGRKLELWSNQVGLQFYTGGMLNATKGKDGAVYDKHAGIALETQGLPDSLNHPNFPSQIVHPGQTYKHYMLYRFTACC* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1095 357 PANTHER ALDOSE 1-EPIMERASE 7 355 - -
Vra3g1095 357 PANTHER ALDOSE-1-EPIMERASE 7 355 - -
Vra3g1095 357 Pfam Aldose 1-epimerase 31 352 IPR008183 GO:0005975|GO:0016853
Vra3g1095 357 Gene3D - 19 356 IPR014718 GO:0030246
Vra3g1095 357 PIRSF GALM 17 356 IPR015443 GO:0016853|GO:0019318
Vra3g1095 357 SUPERFAMILY Galactose mutarotase-like 24 353 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vra3g1095 357 CDD galactose_mutarotase_like 37 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1095 Vra-Chr3 11340868 11342446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1095 12 355 Miscellaneous Gene Families AT3G47800 58.140 9.81e-149 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1095 K01785 - gmx:102659620 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1095 3 11340868 11342446 Vra3g1095 3 11340868 11342446 ECH