Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1093 ATGGAGTTGCTGCCAATATTGATTCTTTCGGTCGACATGTTGGAGGGTCCAACCTTTCTTCTTTCGAGGGACATACCGAGCTCATGTGAGCAAGAGACCAGGTGGATTTACAATTCCTTCTGCGTGATGCAGCTCACAAACAATAAGCGCGGACTGGAGCTAGAGGAAGAGGCTGTGCTGAGAAAGTCATGCAAGCTTTCAGATGCTCCTGAGGAAGGGGAAACAAAAAAGAACATCCAAGATCTTTCCCCATCCCTTAACCAAGCAAATGACCAAAATCATGCAAGTGACCAGTCAGACTCGACTTCACTTATCTACCAACTTGGTCGGGACATCTCAATTAATTGTCTCCTACGATGTTCAAGGTCTGACTACGGTTCGATTGCCTCATTGAACCAAAGTTTTCGGTCTCTCATCCGGACAGGAGAGCTTTACAGGCTGAGGCGGCAGATGGGTATCATAGAGCATTGGGTTTACTTCTCTTGCAATCTCCCTGAATGGGAGGCATTTGATCCAAACACTGGTAGATGGATGCGCTTGCCCAGAATGCCTTCTAATGAATGCTTTATCTGTTCAGATAAGGAGTCATTGGCTGTTGGTACAGAGCTTCTTGTTTTTGGAAAGGAGATAATGTCTCCTGTCATATACAGATATAGCATTCTGATGAACTCATGGTCATCTGGTATGGAAATGAATGTTCCTAGATGCCTGTTTGGTTCTGCCAGCCTTGGAGAAGTCGCCATATTAGCTGGTGGTTGTGATCCGCGGGGCAACATTTTGAGTTCGGCAGAGCTCTATAACTCAGAAACTGGGACCTGGGAGCTTCTACCAAACATGAATAAAGCTAGGAAGATGTGTTCTGGTGTATTTATAGATGGAAAATTTTATGTGATTGGTGGGATTGGAATAGGTAACTCAAGGCAGTTAACATGTGGTGAAGAGTTTGATCTGCAGACGAGAAAGTGGAGAGAAATACCCAACATGTTCCCTAGGAGAAATGGAGGATCTGAGGTGACTGATGTTTCGGCTGCTGCTGAGGCACCTCCGTTGGTTGCAGTTGTAAATAATGTATTGTACGCTGCAGATTATGCCCTACAAGAGGTAAGGAGATATGATAAAGACAATAATTCATGGGTCACTATTGGAAGATTACCTGATCGAATAGTCTCAATGAATGGCTGGGGATTAGCCTTTCGTGCATGTGGGAATAGGCTAATTGTTATTGGTGGGCCAAGAGCTTTGGATGGAAGGGTAATTGAGATCAATGCGTGTGTCCCTGGTGAAGGTGTGCCAGAGTGGAACCTGCTTGCTAGCAGGCAATCAGGAAGCTTTGTGTATAACTGCGCAGTGATGGGATGCTGA 1362 0.453 MELLPILILSVDMLEGPTFLLSRDIPSSCEQETRWIYNSFCVMQLTNNKRGLELEEEAVLRKSCKLSDAPEEGETKKNIQDLSPSLNQANDQNHASDQSDSTSLIYQLGRDISINCLLRCSRSDYGSIASLNQSFRSLIRTGELYRLRRQMGIIEHWVYFSCNLPEWEAFDPNTGRWMRLPRMPSNECFICSDKESLAVGTELLVFGKEIMSPVIYRYSILMNSWSSGMEMNVPRCLFGSASLGEVAILAGGCDPRGNILSSAELYNSETGTWELLPNMNKARKMCSGVFIDGKFYVIGGIGIGNSRQLTCGEEFDLQTRKWREIPNMFPRRNGGSEVTDVSAAAEAPPLVAVVNNVLYAADYALQEVRRYDKDNNSWVTIGRLPDRIVSMNGWGLAFRACGNRLIVIGGPRALDGRVIEINACVPGEGVPEWNLLASRQSGSFVYNCAVMGC* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1093 453 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 13 453 - -
Vra3g1093 453 MobiDBLite consensus disorder prediction 79 98 - -
Vra3g1093 453 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 13 453 - -
Vra3g1093 453 SUPERFAMILY Kelch motif 162 449 IPR015915 GO:0005515
Vra3g1093 453 SMART kelc_smart 246 293 IPR006652 GO:0005515
Vra3g1093 453 SMART kelc_smart 294 341 IPR006652 GO:0005515
Vra3g1093 453 Pfam Kelch motif 282 328 IPR006652 GO:0005515
Vra3g1093 453 Pfam Kelch motif 234 280 IPR006652 GO:0005515
Vra3g1093 453 Gene3D - 147 425 IPR015915 GO:0005515
Vra3g1093 453 MobiDBLite consensus disorder prediction 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1093 Vra-Chr3 11290276 11293066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1093 102 327 EF-hand Containing Proteins AT4G39560 26.957 2.69e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1093 - - gmx:100788507 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1093 3 11290276 11293066 Vra3g1093 3 11290276 11293066 ECH