Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1089 ATGGCAGATCCCACCCCTCTCCTCTGCCAACCCAATCCATCATCTGACACACAAGAACAACCACCGTCACCACCACCACCCAACAAACACCACCCATCCCTGGGATCCACCGTCGAACTCTGCATAGGCGACTTCAACTGGTCCCAGTTCCTTCAATCAGTACTTGTCTCCATCGCCTGGCTCTTCGACGCCCAGCAGACCTTCATCACCGTCTTCACCGACGCCCAGCCCTCGTGGCACTGCACCAGCGCTGACAATGACTGCGCCGCCACCGCCACACTCTGTGACCTTCCCAGGGAGTGGTGGGCGTGGGACGGGCCTGCGCATGCATCCACCGTGTCAGAGTGGGGTCTGGAGTGCGCCAACTCCGTAATATCGGGGCTTCCCGCTTCGAGCTTCTTCGTGGGGTGCTTGGTGGGAGGATTCGGGCTGGCCTCGCTGGCTGACTCCTCGCTCGGGCGAAAGAACACGCTCTTCTTCTCCTGCCTCGTCATGGGCATCACTTCTCTTCTCGCCACTCTCTCGCCCAACGTTTGGATCTACTCCGCGCTCAAGTTCCTCTGCGGCTTTGCTCGCGCCACCATTGGCACTTCCGCGCTGGTTCTCGCCACCGAGATCGTGGGCAAACGGCGGCGCGGCCAGACCAGTGTCATCGGCTTCTTTTGCTTCACTATAGGGTTCTTGTCCTTACCAGTCATGGCTTACGCAAACAAGAGTTCTTCGTGGAGGAACCTTTATCTGTGGACTTCGATTTTAACGATGATCTACTGCATATTGGTGAAGGTGTTCGTTACGGAATCCCCAAGATGGCTTCTAGTGCGAGGAAGGACAGAAGAAGCCGTGGCCACGCTGAAATGCATCACATCTGTGACTCAAAGCAACCTGGATTTGGCCATTAATAACATGTCCCACAAGGAAGAAACTTGGAACGTGGATTTGTTCTCAGCCCTCAGAATTCTTCTACAGAAGAAATGGTCATCTAGAAGGCTCGTCTCAATTATGGGCATGGGTATAGGCATAGGACTCGTCTATTATGGCATGCCACTAGGCCTTCAAAACCTCTCTTTCAACCTCTACTTGGGTGTCACTTTCAATGCCTTATCCGAGTTACCCTCTGCATTGATTGTCTTCTTCTTCATAGACAAGTTCAACAGGAGAATTGCACTCCTTTTCTTTACCATCCTCAGTGGTGTTTTCAGCGTGTTGTCTATCGTTGAAGTCAAGCCATGGAGTAATCTCCAAATAGGGTTCGAGTTGATATCATTCTTCAGCGCCTGTTCTTCGTTTAACATCTACCTCATCTACACCACCGAACTCTTCCCAACATGTGTGAGGAACTCAGCACTGTCCATGGCAAGGTTAGCAGTGGTGTTAGGTGGCGCGTTCAGTCCAATGCTGGTGAGTGCCGGAAGAGCGAACAAGTTTCTGTGTTACGGGGTTTTTGGGTTGGTGATAGGTTTCAGTGGGGTTTATGGAATATTCTTGCCAGAGACAAGGGGAAGAGCACTCTGTGATACAATGGATGAAGAAGAAAGCAAGGAGAATATTGCTTCTGGCATGTTGGCTTAA 1569 0.5194 MADPTPLLCQPNPSSDTQEQPPSPPPPNKHHPSLGSTVELCIGDFNWSQFLQSVLVSIAWLFDAQQTFITVFTDAQPSWHCTSADNDCAATATLCDLPREWWAWDGPAHASTVSEWGLECANSVISGLPASSFFVGCLVGGFGLASLADSSLGRKNTLFFSCLVMGITSLLATLSPNVWIYSALKFLCGFARATIGTSALVLATEIVGKRRRGQTSVIGFFCFTIGFLSLPVMAYANKSSSWRNLYLWTSILTMIYCILVKVFVTESPRWLLVRGRTEEAVATLKCITSVTQSNLDLAINNMSHKEETWNVDLFSALRILLQKKWSSRRLVSIMGMGIGIGLVYYGMPLGLQNLSFNLYLGVTFNALSELPSALIVFFFIDKFNRRIALLFFTILSGVFSVLSIVEVKPWSNLQIGFELISFFSACSSFNIYLIYTTELFPTCVRNSALSMARLAVVLGGAFSPMLVSAGRANKFLCYGVFGLVIGFSGVYGIFLPETRGRALCDTMDEEESKENIASGMLA* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1089 522 SUPERFAMILY MFS general substrate transporter 122 503 IPR036259 -
Vra3g1089 522 MobiDBLite consensus disorder prediction 17 31 - -
Vra3g1089 522 Pfam Sugar (and other) transporter 114 503 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra3g1089 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 52 500 IPR020846 GO:0022857
Vra3g1089 522 MobiDBLite consensus disorder prediction 1 33 - -
Vra3g1089 522 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 28 515 - -
Vra3g1089 522 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 3 28 515 - -
Vra3g1089 522 Gene3D MFS general substrate transporter like domains 47 511 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1089 Vra-Chr3 11240412 11242725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1089 1 513 Organic Solute Cotransporters AT1G16390 58.238 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1089 - - gmx:100812722 852.047