Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1084 ATGGGAGCTGGAAGTTTCCTGAAGGTTGTTCTGAAAAATTTTGATGTTCTTGCTGGGCCTGTGCTGAGTCTTGCGTATCCTCTATATGCCTCGGTTAGGGCAATTGAGAGCAAGTCTCCCGTTGATGACCAGCAATGGCTCACTTATTGGGTTCTGTATTCCTTGATCACCCTCTTTGAACTTACTTTTGCCAAAGCTCTTGAATGGATTCCCATTTGGTCATATGCAAAGCTGATCCTTACCAGCTGGTTGGTCATTCCCTACTTCAGTGGTGCAGCCTATGTTTATGAGCACTATGTTAGACCTTTCTTTGTCAGTACTACTGAGAACGTTAACATCTGGTACGTTCCAAGCAAAAAGGATACTTTGGGGAAGCCAGAGGACATGCTAACTGCGGCAGAGAAGTACATTGAAGAGCATGGAACTGAAGCATTTGAGAATCTGCTTAACAAGGCTGGTAAAACTAGGAAAAGTAGCAAGCATGCAAATGGAAGCTATTGA 501 0.4391 MGAGSFLKVVLKNFDVLAGPVLSLAYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKALEWIPIWSYAKLILTSWLVIPYFSGAAYVYEHYVRPFFVSTTENVNIWYVPSKKDTLGKPEDMLTAAEKYIEEHGTEAFENLLNKAGKTRKSSKHANGSY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1084 166 PANTHER HVA22-LIKE PROTEIN 1 160 - -
Vra3g1084 166 PANTHER HVA22-LIKE PROTEINS 1 160 IPR004345 -
Vra3g1084 166 Pfam TB2/DP1, HVA22 family 27 103 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1084 Vra-Chr3 11199844 11201998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1084 K17279 - gmx:100527841 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1084 3 11199844 11201998 Vra3g1084 3 11199844 11201998 ECH