Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1079 ATGGCTACAAAAGGGAACCCTGGAGACAATAGAAATAATAGGAGTCCAATTTCTGTTTTCATCATAGTTGGTTTGTGTGGCTTCTTCTATATATTGGGTTTGTGGCAACGGAGTGGCTTTGGAAAGGGAGATAGCATAGCTGTTGAGATCACTAAACACACAGATTGCAGTGTTCTATCTGATCTAAACTACGAGACTCACCATGATGATGATTTTGGAACATCTGATGGTTCTGACATACAAGTCAAGGAGTTCAAGCCTTGTGATGATCGTTACATTGATTTCACGCCTTGTCACGATCAAATGAGAGCGATGAAATTTCCTCGAGAAAATATGGCTTACAGAGAAAGGCACTGTTTTCCTGATGAAGACAAATTGCGTTGTCTCATACCTGCCCCAAGAGGATATGCAACACCATTTCCATGGCCCATGAGTCGTGATTATGTACCATATGCAAATGCACCTTACAAGAGTTTGACAGTTGAGAAGGCTGTGCAGAATTGGATACAATATGAAGGAAATGTTTTCAGGTTCCCTGGTGGTGGAACGCAATTTCCCAACGGCGCTGATGCTTACATTGATGAACTTGCATCTGCTATTCCATTGGACAATGGGATGGTTAGAACTGTATTGGATACTGGTTGTGGGGTTGCTAGTTTCGGTGCATACCTATTTAAGAAAAATGTTATTGCTATGTCAATTGCACCAAGGGACTCTCATGAAGCACAAGTTCAATTTGCTTTGGAAAGAGGTGTTCCAGCAATCATTGGTGTTCTTGGAACAGTAATGCTTCCCTTCCCGTCCGGAGCTTTTGATATGGCGCATTGTTCTCGCTGCTTGATTCAATGGGGTTCAAATGATGGAATATACATGAAGGAAGTGGACCGGGTTCTTAGACCTGGTGGTTACTGGGTATTGTCTGGTCCTCCTATCAACTGGAGAATGCACTTTCGTGCGTGGCAGCGTCCTGAATATGAGCTTGAGGAGGAACAACGGAAGATTGAGGAAATTGCTAAACTTCTATGCTGGGAAAAGAAATATGAAAAAGGTGAAACTGCGATCTGGAGAAAACAATTGCAAAGTGGTGATTGCACTGAAAGAGAAACTCAAACAACAATGTGTGCAACCACATATTCTGATGATGTCTGGAAAATGGAAAGTTGTGTAACTCCTAGTAAACCTACTGGTCCATGGAAGCCATTCCTAGAGAGACTCAATGCTGCTCCTTCCAGAATTACCAGTGGATTTGTTCCTGGTGTATCTGTGGAAGCATTTGAAGAGGACAACCGATTATGGAAGAAACATGTGAATGCTTACAAACGGATCAACAAAATCATTAGCACGGGGAGGTATCGCAACATAATGGACATGAATGCTGGCCTGGGAAGTTTTGCTGCTGCACTGGAATCTCCCAAATTATGGGTTATGAATGTTGTGCCCACAATTGCTGAGAAAGCTAACCTGGGTGTTATATTTGAGCGTGGATTGATTGGCATTTATCATGACTGGTGTGAAGGCTTCTCCACATATCCAAGGACATATGACCTTATCCATGCAAATGGTGTTTTCAGCTTGTACAAGAATGGATGTGATGCAGAAGACATTCTATTGGAGATGGACCGTATATTACGGCCCGAAGGAGCAGTAATATTCCGAGATCAAGCTGATGTGCTAGTGAAGGTGAAAAGAATTGTGAAAGGAATGAGATGGAATACCAAAATGGTGGATCATGAGGATGGTCCAATGGTTTCAGAGAAGATGTTGTTTGCTGTCAAGCAGTATTGGGTTGCAGGTGACAACACCACTAGCTCGGAGTGA 1818 0.4274 MATKGNPGDNRNNRSPISVFIIVGLCGFFYILGLWQRSGFGKGDSIAVEITKHTDCSVLSDLNYETHHDDDFGTSDGSDIQVKEFKPCDDRYIDFTPCHDQMRAMKFPRENMAYRERHCFPDEDKLRCLIPAPRGYATPFPWPMSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPNGADAYIDELASAIPLDNGMVRTVLDTGCGVASFGAYLFKKNVIAMSIAPRDSHEAQVQFALERGVPAIIGVLGTVMLPFPSGAFDMAHCSRCLIQWGSNDGIYMKEVDRVLRPGGYWVLSGPPINWRMHFRAWQRPEYELEEEQRKIEEIAKLLCWEKKYEKGETAIWRKQLQSGDCTERETQTTMCATTYSDDVWKMESCVTPSKPTGPWKPFLERLNAAPSRITSGFVPGVSVEAFEEDNRLWKKHVNAYKRINKIISTGRYRNIMDMNAGLGSFAAALESPKLWVMNVVPTIAEKANLGVIFERGLIGIYHDWCEGFSTYPRTYDLIHANGVFSLYKNGCDAEDILLEMDRILRPEGAVIFRDQADVLVKVKRIVKGMRWNTKMVDHEDGPMVSEKMLFAVKQYWVAGDNTTSSE* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1079 605 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 592 IPR004159 GO:0008168
Vra3g1079 605 PANTHER METHYLTRANSFERASE PMT2-RELATED 6 600 - -
Vra3g1079 605 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 438 554 IPR029063 -
Vra3g1079 605 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 332 IPR029063 -
Vra3g1079 605 Gene3D Vaccinia Virus protein VP39 161 374 IPR029063 -
Vra3g1079 605 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 6 600 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1079 Vra-Chr3 11132650 11137536 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1079 - - gmx:100807547 1122.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1079 3 11132650 11137536 Vra3g1079 3 11132650 11137536 ECH