Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1073 ATGTCAGAGAAGATCATGTTTCACTCAAGATTTATATTTTACGTGATGATCATTTCTATGTTCCTTTTGGTCCTGTCATCTCTTTTCCTACTCCAGTTTAGCAGTCATTCTTTGATACCTAGATCAGTGTTAGAGCTTATTCTTGTCAATAATGCGTCACTTTACTTCATGCCTAAATTGAAGAGAGACCAGAACGTACTCCCTCCTTACGTTTCTGGGGATTTAAATTTTCAATCACAAAAGTCCAGAGAATCCGACTGTCAAGCTTCTGATTCAAGCAAGAAAACAAGTTCTGCAGGACAGAAGATGAATGTGGCATCTCACCCAGTTCGGCCTTTATTGAGAGTATTCATGTATGACTTACCCCCAGAATTTCACTTTGGGTTATTGGGTTGGAAGGGAAGTTTGAATCAAACATGGCCTGAGGTGGATAACCCTGAAGGTATCCCACGCTATCCAGGTGGTCTGAACTTGCAGCACAGCATGGAGTACTGGCTCACCCTTGATCTTCTGTCATCAAACACAGCTAGAGTTGGTCATTCTTGCTCTGCAATCAGAGTGCAGGATTCAAGTCAAGCAGATGTAATTTTTGTGCCATTTTTCTCATCTCTAAGTTACAACAGGCATTCCAAGCTTCATGGAGAGGAAAAAGTTAGTGTTAACAAAATGTTGCAACACAAATTGGTGCAGTTCTTGATGGACCAGAAAGAATGGAAACGTTCAGGAGGGAAGGATCATCTGATTATAGCCCACCATCCTAACAGCTTGTTGGATGCAAGAAGAAAATTGGGTTCTGCTATGCTTGTGCTTGCAGATTTCGGAAGGTATCCTCCTCAATTAGCAAATATCAAGAAAGATGTAATAGCCCCCTACAGGCACCTAGTAGGCACCATACCAAGAGCTAAATCAGCTTCATATGAAGAACGTACCACACTGGTGTATTTCCAGGGAGCAATATACAGGAAAGACGGAGGAGCCATTCGCCAGGAACTGTACTACCTCCTGAAAGAAGAGAAAGATGTGCATTTCAGTTTTGGGAGCATAGGAGGAAATGGGATCAATCAGGCAAGCCAGGGCATGGCCTTATCAAAATTCTGCCTCAACATTGCTGGTGATACCCCATCCTCGAATAGACTCTTTGACGCAATAGTAAGCCATTGTGTGCCTGTGATCATCAGTGATGAAATTGAACTACCCTTTGAAGATGTTTTGGACTACTCAGATTTTTCTGTATTTGTGCGTGCCTCTGATGCTGTGAAGAAAGGCTACCTGCTGAATCTCCTTCGTTCTATCAAACGGGAAGAATGGAACAAGATGTGGGAAAGATTGAAGGAAATTACACCCCACTTTGAGTATCAGTATCCATCACAACCTGGGGATGCAGTGAATATGATTTGGCAGCAAATTGCAACAAAGATATCTTCAATAAGATTCAATTTGCACAGAAAGAACAGATACCAGAGATCTCAGCTTCGTGTTAAGACAAACTGA 1491 0.4205 MSEKIMFHSRFIFYVMIISMFLLVLSSLFLLQFSSHSLIPRSVLELILVNNASLYFMPKLKRDQNVLPPYVSGDLNFQSQKSRESDCQASDSSKKTSSAGQKMNVASHPVRPLLRVFMYDLPPEFHFGLLGWKGSLNQTWPEVDNPEGIPRYPGGLNLQHSMEYWLTLDLLSSNTARVGHSCSAIRVQDSSQADVIFVPFFSSLSYNRHSKLHGEEKVSVNKMLQHKLVQFLMDQKEWKRSGGKDHLIIAHHPNSLLDARRKLGSAMLVLADFGRYPPQLANIKKDVIAPYRHLVGTIPRAKSASYEERTTLVYFQGAIYRKDGGAIRQELYYLLKEEKDVHFSFGSIGGNGINQASQGMALSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSDFSVFVRASDAVKKGYLLNLLRSIKREEWNKMWERLKEITPHFEYQYPSQPGDAVNMIWQQIATKISSIRFNLHRKNRYQRSQLRVKTN* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1073 496 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 2 485 IPR004263 GO:0006486|GO:0016757
Vra3g1073 496 MobiDBLite consensus disorder prediction 78 104 - -
Vra3g1073 496 Pfam Exostosin family 114 426 IPR040911 -
Vra3g1073 496 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 2 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1073 Vra-Chr3 10951841 10955985 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1073 - - gmx:100795371 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1073 3 10951841 10955985 Vra3g1073 3 10951841 10955985 ECH