Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1052 ATGCCAAGGGTTTCGGCGAATCCTTCTTCCTCAGGCTTATTCTCTGTGGCTTCCACCGTCAGAGCTTACGCGCTCCCTATTGTTCTCTTCGCCGGAGCCATGTACTACCAGCTCTTCGTTATTCCCAATGCCTTCCCTCGTTCTCATTACGATGTTTTGCAAATTGAGAGCTATAGTTCTGTTGACAAAGTGCAGGACGCTTATGAGAAGCTTGAATCTAAAATGAATTCTGCGGAGGAAGCTTTTGATATTCACGAGTTTTTAAAGATTCGGTATGCTTATGAGTTGCTGACAAATCCTTTATGGAAAAGAGACTATGACATATTTGGTATTGATGAACAACTTCATATTGTTGAGAGTGCCAGCAAGCATTATGCAGGGAAACATATTTCAGAATTGGACTTCCCTTTACTACAGGCCCAATCTGGATCTGTGGATCATTCTTCTAAAGTCATTACAGCTAGTGACTTCCAGTATATATTTCCAGATGTTAAGCCATGGCTAATGCAGTTGTATTCATCAGGGAGCGAAAATTGTGCTCAATTTTCCAAGTCCTGGAATAAAATTGCTTCTTTATTGGATGATGTTGCAAACATTGGTGTGGTGGAACTTGGTGAGAAGGAGCTTGCCATATACCTTGCTGATAGAAGATCAACTGGAAAACCTTTTTTTAGAAATGGTGTTCCATCTCTTGTTGCCATTCCTGCAGGATGTCGATCTCCTAAATGTATTAGGAGGTTTAATAGTGAGCTTACTGTTGATAAGGTTACAAATTGGTTTGCAACAACTATACTGGCTTTACCTCAAATTAACTACTACTCAAGGGAAACTCTGGTACCAAATTTTCTTGGTAAAACTAGCCATCATAAGGTAAAAGTCCTCTTTTTCTCAACACTTGGTGAGCGTGCTGCCCCATTTATACGACAAGCAGCTAAAGACTATTGGGCTTTTGCTTCATTTGCATTCATTCTCTGGCGGGAAGAGGAATCTTCCTATTGGTTGGGAGCATTTGGGGTGGAATCTGCACCGGCTATTGTATTTCTTAAAGATCCTGGTGTCAAACCTGTGGTTCACCATGGTTCTGTCAACAATTCAATTTTTTTGAACTTGATCGAAAATAATAAACAGCAAGAGCTTCGGCAACTAAGGAGTGTGACATCAAGGGAGCTAGGTTGTGATCCTCACGGCTATTCTCGTGCTGGTTATGATACAATGATATGGTATTGTGCTATTGTGGTTGGAAGGCCAAGTCTGGAGCTGAACAGAATGCGTGAAACTATGTACAGGGTCCAGGAAACATTTTCTAAGTACAGCCAAGTGGATGCATCATCTGAAAATCAATCCTTAGCTCCAGCTGTGGATGCATTTAAGAGAAGGCGATTGACATTTGCTTGGCTTGATGGTGAAAAGCAAAAGGATTACTGCCAATTTTACCTTGGTCAAGCGGGTACTGATCACACTTGTGGGCAACGACGGAGTGCGACTGATATTCCTAGGTTGTTTGTCATTCGTTACCTGAGGAATAATAGTGCTGTTGATTTGAGAACAGAACAAAAATCCAAGTGGAAATCATCACTGGTCCAAGATCTAATTACTGATTCTGATCTTGCAGGCCAGTTTGTCGCTGGGTACAAGGGCGAAGATGATGTTTTACAGATAACCCACTGGCTTGCAAACATTATTTCTGATGGTGACTCTAGAGACTTACCATTCTTTACGCTAAGAACTCCTGAGCTTGTCCCGGATGACACAGAACCAATTTGGTCCGTAGCAGCACAAAATATTCCTCTGGAAAATCTGAAGCAGAGTATTCTTGGTAGTCTTAGTGGACTCTCTCTATACCGTGAGGATCCTAGAGTTGGTCCGTTTTTGCTTTTGGGTGCATTAATTTCTTTGGGTACTATATGGCTGCGTAGGAGCCAACAAGTTCATCCTTCTGTACCAAATCAATCTAGTTCCAATCAGCCATCTGAATCAAATCAACCAAGTCAACCCAGTTCAAAGATGTCTTCACAGGATGAAAAGGAACAAATACCAAGAAACCGGGTCAGGAGTCGGTCAAATAAAAAACCACCCCCTTCTATGACTGATTTTGAACCATCGAATTCTTACCAGGTTCCACTATCAGATTCTGACTCTGAGTAA 2145 0.4172 MPRVSANPSSSGLFSVASTVRAYALPIVLFAGAMYYQLFVIPNAFPRSHYDVLQIESYSSVDKVQDAYEKLESKMNSAEEAFDIHEFLKIRYAYELLTNPLWKRDYDIFGIDEQLHIVESASKHYAGKHISELDFPLLQAQSGSVDHSSKVITASDFQYIFPDVKPWLMQLYSSGSENCAQFSKSWNKIASLLDDVANIGVVELGEKELAIYLADRRSTGKPFFRNGVPSLVAIPAGCRSPKCIRRFNSELTVDKVTNWFATTILALPQINYYSRETLVPNFLGKTSHHKVKVLFFSTLGERAAPFIRQAAKDYWAFASFAFILWREEESSYWLGAFGVESAPAIVFLKDPGVKPVVHHGSVNNSIFLNLIENNKQQELRQLRSVTSRELGCDPHGYSRAGYDTMIWYCAIVVGRPSLELNRMRETMYRVQETFSKYSQVDASSENQSLAPAVDAFKRRRLTFAWLDGEKQKDYCQFYLGQAGTDHTCGQRRSATDIPRLFVIRYLRNNSAVDLRTEQKSKWKSSLVQDLITDSDLAGQFVAGYKGEDDVLQITHWLANIISDGDSRDLPFFTLRTPELVPDDTEPIWSVAAQNIPLENLKQSILGSLSGLSLYREDPRVGPFLLLGALISLGTIWLRRSQQVHPSVPNQSSSNQPSESNQPSQPSSKMSSQDEKEQIPRNRVRSRSNKKPPPSMTDFEPSNSYQVPLSDSDSE* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1052 714 Coils Coil 61 81 - -
Vra3g1052 714 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 29 713 - -
Vra3g1052 714 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 29 713 - -
Vra3g1052 714 Gene3D Glutaredoxin 146 266 - -
Vra3g1052 714 SUPERFAMILY Chaperone J-domain 38 110 IPR036869 -
Vra3g1052 714 MobiDBLite consensus disorder prediction 643 714 - -
Vra3g1052 714 SUPERFAMILY Thioredoxin-like 150 260 IPR036249 -
Vra3g1052 714 Coils Coil 368 388 - -
Vra3g1052 714 Gene3D DnaJ domain 46 111 IPR036869 -
Vra3g1052 714 MobiDBLite consensus disorder prediction 643 672 - -
Vra3g1052 714 ProSiteProfiles dnaJ domain profile. 48 110 IPR001623 -
Vra3g1052 714 MobiDBLite consensus disorder prediction 688 714 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1052 - - vra:106757965 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1052 3 10607886 10627748 Vra3g1052 3 10607886 10627748 ECH