LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra3g1036	ATGCTCTCTGTTACATTTTCAATGTCTCCTACTGCAGTCATGCCTGCAAAGACCTCCCTAGCCTTCTCCCACCACATTGTTCCTTCCGGCAAGGGTCTTTATCCGATAACATTCACGGGCGCTTCATCCTCACGCGCTCCTCTTAAGTGGAGGTGTTCTTCATTTCCAAGCTCTTACCATGTTGAGGAAGAAGCAAAGTTTGTAGAAGCTTCAAAGAATGGGAACTTGATTCCACTCTGTCAGTGTATATTCTCTGACCAGCTTACTCCTGTTCTTGCTTACCGAATTTTAGTCAAGGAAGATGATCGAGAGGCTCCAAGCTTTCTTTTTGAGTCTGCAGAGCCTAGCTATCATGCTTCAAGTGTTGGACGCTATAGTGTTGTGGGAGCTAACCCAACCATGGAAGTTGTGGCCAAAGAAAATAAGGTTACCATAATTGACCATGAATCTGGAAATTTAATAGAGAAGAATGTTGATGATCCTATAATGATTCCGAAAAAAATCTCAGAGGACTGGAAACCCTGTCTCATTGATAAACTTCCGGATGCATTCTGTGGTGGCTGGGCTGGTTATTTCTCTTATGACACAGTTCGATATGTGGAAAAGAAAAAGTTACCATTCTCAAATGCTCCAAAGGATGATAGAAACCTTGCTGACATACATCTTGGTTTATATGAGAGTGTGATTGTGTTTGACCATGTGGAAAAGAAAGCATATGTGATTCTTTGGATAAGAACTGATAGGTACTCCTCAGTTGAGAGGGCCTACAAGGATGGAACCGAAAGATTAGAAAAATTGGTGGCCAAATTACAATATGGCCAACCTCCAAGGTTGGCTCCAGGCTCTGTGGATTTACAGACTCATCATTTTGGTCCACAATTGAAGAGGTCGAGCATGACTAAAGAAGCATACAAGGAGGCAGTACTTCAGGCAAAAGAGCATATTAAAGCAGGGGATATTTTCCAGATTGTGTTAAGTCAGAGATTTGAGCGAAGAACATTTGCTGATCCATTTGAAGTTTATAGAGCATTGAGAGTTGTGAACCCAAGTCCATATATGGCCTATTTGCAGGCCAGGGGATGTATTTTAGTTGCTTCAAGTCCAGAGATTCTTACGCGTATAAAGAAGAACAAGATTGTGAACCGTCCATTGGCTGGGACAGCTAGAAGGGGTAAAACACCTGAAGAAGATGCAAGGTTAGAATCATTACTTCTGAAAGATGAAAAGCAATGTGCAGAGCATGTGATGTTGGTGGATTTGGGACGCAATGACGTAGGAAAGGTTGCTAAAAGTGGTTCTGTGAAAGTGGAACAACTTATGAATATTGAACGATACTCGCATGTGATGCACATAAGCTCAACGGTAAGTGGAGAGTTGCAAGAGCATTTGAGTAGCTGGGATGCCCTGCGTAGTGCATTGCCAGTGGGAACTGTGAGTGGAGCACCAAAGGTGAAGGCGATGGAGTTGATTGATGAGTTAGAGGTGACAAGAAGAGGGCCTTACAGCGGAGGATTTGGATACATATGTTTCTCCGGCGAGATGGATGTGGCTCTTGCTCTGAGGACAATGGTATTTCCGACAGGAACAAGGTATGACACAATGTACTCATACAAAGATCTCAACCAGCGACGCGAGTGGATTGCTTACCTTCAAGCTGGTGCTGGAATAGTTGCTGACAGTGTTCCTGAAGATGAACACCAAGAGTGTCAAAACAAAGCTGCTGCTCTTGCTCGTGCCATTGACTTGGCTGAGTCCTCATTTGTTCATAAATAA	1773	0.4337	MLSVTFSMSPTAVMPAKTSLAFSHHIVPSGKGLYPITFTGASSSRAPLKWRCSSFPSSYHVEEEAKFVEASKNGNLIPLCQCIFSDQLTPVLAYRILVKEDDREAPSFLFESAEPSYHASSVGRYSVVGANPTMEVVAKENKVTIIDHESGNLIEKNVDDPIMIPKKISEDWKPCLIDKLPDAFCGGWAGYFSYDTVRYVEKKKLPFSNAPKDDRNLADIHLGLYESVIVFDHVEKKAYVILWIRTDRYSSVERAYKDGTERLEKLVAKLQYGQPPRLAPGSVDLQTHHFGPQLKRSSMTKEAYKEAVLQAKEHIKAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMAYLQARGCILVASSPEILTRIKKNKIVNRPLAGTARRGKTPEEDARLESLLLKDEKQCAEHVMLVDLGRNDVGKVAKSGSVKVEQLMNIERYSHVMHISSTVSGELQEHLSSWDALRSALPVGTVSGAPKVKAMELIDELEVTRRGPYSGGFGYICFSGEMDVALALRTMVFPTGTRYDTMYSYKDLNQRREWIAYLQAGAGIVADSVPEDEHQECQNKAAALARAIDLAESSFVHK*	591

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra3g1036	590	Pfam	chorismate binding enzyme	301	572	IPR015890	-
	Vra3g1036	590	PANTHER	AMINOBENZOATE/ANTHRANILATE SYNTHASE	12	590	IPR019999	GO:0009058
	Vra3g1036	590	PRINTS	Anthranilate synthase component I signature	402	415	IPR019999	GO:0009058
	Vra3g1036	590	PRINTS	Anthranilate synthase component I signature	416	429	IPR019999	GO:0009058
	Vra3g1036	590	PRINTS	Anthranilate synthase component I signature	496	510	IPR019999	GO:0009058
	Vra3g1036	590	PRINTS	Anthranilate synthase component I signature	511	525	IPR019999	GO:0009058
	Vra3g1036	590	TIGRFAM	trpE_most: anthranilate synthase component I	85	581	IPR005256	GO:0000162\|GO:0004049
	Vra3g1036	590	Pfam	Anthranilate synthase component I, N terminal region	86	240	IPR006805	GO:0009058
	Vra3g1036	590	Gene3D	Anthranilate synthase	56	588	IPR005801	GO:0009058
	Vra3g1036	590	PANTHER	ADC SYNTHASE SUPERFAMILY PROTEIN-RELATED	12	590	-	-
	Vra3g1036	590	SUPERFAMILY	ADC synthase	74	584	IPR005801	GO:0009058

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra3g1036	Vra-Chr3	10350865	10355401	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra3g1036	K01657		-	gmx:100790900	1004.97