Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1025 ATGGCGTCATCGCGTCCACCACCGTCGAAATCAGTGGATCTAGACCTCACCATCGTGGCGGCGAAGCACCTCAAGAACGTCAACTGGAAGAACGGTGATCTGAAGCCCTACGTCGTTTTCTGGGTGGACCCCGAGCGGCGTCTGGCCACCAAATCCGACGACTCCGGCAACACCTCCCCGGTCTGGAACGAGCGCTTCGCCCTACCCCTCTCTCTCCCCCTCCACGACTCCTTCCTCACCCTGGAGATCTTCCACTCCAAACCCTCTGACACCCTCAAACCCCTCGTCGCCACTCTCCGCCTCCCTCTCAAGGACCTTCACGACCTCCAGGACTCCACGCGCCTCCGCAAGTTCCCCCTTTCCCGCCCCTCCGGCCGCCCCCACGGCAAGATCCACCTAAAGCTTGGCCTCCTTGGCCGCCCCCAATTCCAATCCCTCGACTATCTCAACCCTAACCCTAACCCCACCCCCAATCCCAGCCCCAACCATAACCCTAATTTCGTCTTCTACAGGGGATATTCCCATTCCCATTCCCCTTCTCCACCACCATCTCCATACCCCTCGTACCCCTCTTACCCCGATTCTTATAGTTCTTCTTACTACCCTGGTTACTATTCTGGTGCTCTTCCTCCTCCTCCTCCGAGACCCTTCATCGACCGTTACGCTGGGCCCAGCGGTCCTTCTGCTCCGCTTGATTATTCCACCTCCTACGATCCCAAGCCCAGGCCTTCCAAAATGGGTCTAGGCGCTGGCCTCGCTGTCGGCGCTGTTGCTGGAGCTCTCGGTGGGCTTGCTCTCGAGGAGGGGCTTAAATACGAGGAAGACAAAATCGCGGATAGGGTCGAGAACGACGTCGCTGCTAGTATTGCGCGCGACGATTACAGCGATTATCGAGTGGATTACTGA 906 0.585 MASSRPPPSKSVDLDLTIVAAKHLKNVNWKNGDLKPYVVFWVDPERRLATKSDDSGNTSPVWNERFALPLSLPLHDSFLTLEIFHSKPSDTLKPLVATLRLPLKDLHDLQDSTRLRKFPLSRPSGRPHGKIHLKLGLLGRPQFQSLDYLNPNPNPTPNPSPNHNPNFVFYRGYSHSHSPSPPPSPYPSYPSYPDSYSSSYYPGYYSGALPPPPPRPFIDRYAGPSGPSAPLDYSTSYDPKPRPSKMGLGAGLAVGAVAGALGGLALEEGLKYEEDKIADRVENDVAASIARDDYSDYRVDY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1025 301 Pfam C2 domain 13 110 IPR000008 -
Vra3g1025 301 MobiDBLite consensus disorder prediction 215 242 - -
Vra3g1025 301 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Vra3g1025 301 SMART C2_3c 13 115 IPR000008 -
Vra3g1025 301 MobiDBLite consensus disorder prediction 144 174 - -
Vra3g1025 301 Gene3D C2 domain 2 139 IPR035892 -
Vra3g1025 301 PANTHER INGRESSION PROTEIN FIC1 8 297 - -
Vra3g1025 301 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 8 297 - -
Vra3g1025 301 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 139 IPR035892 -
Vra3g1025 301 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1025 Vra-Chr3 10263708 10265138 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1025 - - gmx:102666594 386.341