Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1009 ATGGAGGAGCAGAAGAAGCAACACAGATTGTTGCTGATGCCGTCACCCTTACAAGGGCACATAACACCCTTACTCCACCTCGCTCAAATTCTCTTCTCAAAGGGCTTCTCCATCACTATTCTTCACACCCTTTACAACTCTCCAGACCCTACTTCCTATCCTCAATTCTCCTTCCACGCCATCCCTGATGGCTTATCCGAATCAGAAACAGCCACGCTCGACTCCGTCAACCTCACCGCCCTTATCAACATCAGATGCCTCCACCCTTTGAAGGAATACTTGCTTTCGCTGCTCTCAGACTCTCTTCAATCTGTTCCATGCTTCATTTCCGATGCTGCTCTTCATTTCACTCAATCTGTCTGCGACGAGTTTAAGCTCCCTCGCCTTGTGCTCAGAACTGGTGGGGCATCTTCCTTCCTTGTTTTTGCCTCCTTTCCTCTCCTTAGAGAAAAGGGCTACCTCCCCGTACAAGAATCTAGATTGGAAGAGCCTGTGGTTGATTTCCCACCATTGAAGGTGAAAGATCTTCCTATGTATCAGTCGAATGATCCCGAGACATTCTACAAACTAGTTTGTCGTTTTGTTGAGGAATGCAAAGCATCTTCAGGGGTTATTTGGAACACATTTGAAGAATTGGAATCCTCTGCATTGACAAAACTGCGCCAAGATTTTTCCATACCAATATACCCTATAGGCCCTTTTCACAAAGGCTTGCTTACTGGCTCAGCTTCTTCTGCTAGCTTGTTGACTCCAGACAAAAGCTGCATGTCTTGGTTAGACAGACAAGAACATAACAGTGTTGTTTATGTGAGTTTTGGGAGTATTGCATCAATAAGTGAGGATGAGTTCTTGGAGATAGCTTGGGGGTTATCCAACAGCCAGCAACCGTTCTTGTGGGTGATTCGACCTGGGTTAATCCGTGATTCAGAATGGCTTGAAGCATTGCCAAGTGGGTTCCTAGAGAATTTGGGAGAAAGAGGCTACTTTGTGAAATGGGCTCCTCAAGAACAAGTTCTGAGCCATCCTGCAGTGGGAGCATTTTGGACTCATAATGGTTGGAACTCAACCTTGGAGAGCATATGTGAAGGGGTTCCCATGATTTGTATGCCATGTTTTGCAGACCAAAAAGTGAATGCCAAATTTGCAAGCAGTGTTTGGAAGGTTGGAGTGCAACTAGAGAATAAGCTAGAGAGACGAGAGGTAGAGAGGACTATTAAAAAAGTAATGGTTGGGGATAAAGCGAAGGAGATTAGGGAGAATGCTTTGAATTTGAAGGAAAAGGCAAGTGCTTGCTTGCGAGAAGGTGGTTCATCTCACTGTTTCCTTGATAGCTTGGTTAGTGACATATTATCAGCGGCATCTTCTGCATCTAGAGCTCGGTGA 1383 0.4534 MEEQKKQHRLLLMPSPLQGHITPLLHLAQILFSKGFSITILHTLYNSPDPTSYPQFSFHAIPDGLSESETATLDSVNLTALINIRCLHPLKEYLLSLLSDSLQSVPCFISDAALHFTQSVCDEFKLPRLVLRTGGASSFLVFASFPLLREKGYLPVQESRLEEPVVDFPPLKVKDLPMYQSNDPETFYKLVCRFVEECKASSGVIWNTFEELESSALTKLRQDFSIPIYPIGPFHKGLLTGSASSASLLTPDKSCMSWLDRQEHNSVVYVSFGSIASISEDEFLEIAWGLSNSQQPFLWVIRPGLIRDSEWLEALPSGFLENLGERGYFVKWAPQEQVLSHPAVGAFWTHNGWNSTLESICEGVPMICMPCFADQKVNAKFASSVWKVGVQLENKLERREVERTIKKVMVGDKAKEIRENALNLKEKASACLREGGSSHCFLDSLVSDILSAASSASRAR* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1009 460 Gene3D Glycogen Phosphorylase B; 250 430 - -
Vra3g1009 460 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 5 453 - -
Vra3g1009 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 450 - -
Vra3g1009 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 258 416 IPR002213 GO:0008194
Vra3g1009 460 PANTHER CYTOKININ 7-BETA-GLUCOSYLTRANSFERASE-RELATED 5 453 - -
Vra3g1009 460 Coils Coil 414 434 - -
Vra3g1009 460 Gene3D Glycogen Phosphorylase B; 10 436 - -
Vra3g1009 460 CDD GT1_Gtf-like 9 430 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1009 Vra-Chr3 10145934 10148074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1009 3 456 Glycosyltransferase AT3G55700 51.188 1.03e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1009 - - gmx:100783133 754.592