Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1008 ATGAGTGGAAGAAAGGGTCGGAGATTGTTGCTTATTCCTTTGCCAGTCCAAGGCCACATAAACCCAATGCTTCAACTCGCAGAAATCCTTCACTCAAAGGGTTTTTCTATCACCATCATCCACGCCACTTTCAATTCCCCAGACCCTTCCAACTATCCTCACTTCACCTTCTCCTTTTTCCAAGACGGTTTGTCTCAGACTCAACCCTCCGATCTCTTAAATTTCCTCGTCGAATTCAACGTCAAATCTGTCGACCCTTTCAAAGACTGCGTCACCAAGCTACTACGGACTCATGAAGCGGAGGAGGAACCTGTGGCGTGTTTGATTTCAGATGCTATTTGTTACTTCACTCAAGCTGTTGCCGACAACCTTCAGCTTCCTAGGATTGTATTGCGAACTAGTAGCATCTCTTCCTACGTTGCTTTCCTCGCCTATCCTTTGTTCAGACAAAGAGGTTACATTCCCACTCAAGCTTGCATATTGGAGGAGGAAGTGGAAGAACTGGCACCACTGAGAGTGAAAGACCTACCTCTGATTAAGACGGAGGAGCCAGAAAAGTACTACGAATTATTGAGCAATTTGTTGAAAGAGACAAAGGGTTCGTTGGGAGTGATTTGGAATTCCTTCGAAGGGTTAGAGTCACCTGCATTGAAAAAACTGAGCAAGGAGTTTTCGATACCAATGTTCCCGATAGGACCCTTTCACAAGTACTTGTCTTCATCCTCTTCCTCTAGCAGCTTGATCTCACAAGACCAAAGTTGCATAACTTGGTTAGACACACACACACCCAACTCCGTGGTGTATGTGAGCTTTGGGAGTCTTGCTGCTATAACGGAGACTGAGTTCGTAGAGATAGGTTGGGGTTTAGGCAATAGTAAGCACCCATTCTTATGGGTGGTTCGACCGGGGCTTATCAAGGGCTCGGAATGGCTGGAGACACTGCCAAGTGGGTTCATGGAGAATCTGGAAGGGAGAGGGCTAATAGTGAAATGGGCCCCACAGCAAGAAGTGTTGGCACACTCAGCAGTAGGCGCATTTTGGAGTCACAATGGTTGGAATTCGACTTTGGAGAGTATTTGCGAAGGGGTTCCTATGATATGCATGCCCCTTTTCACAGACCAAAAAGTGAATGCAAGGTATGTGAGCCATGTTTGGAAGGTTGGGTTGCAGCTAGAGAAGAAGGTGGAAAGAGGAGAGGTAGAGAGGATCATCAGAAGATTGATGGATGCCAAAGCCCAAGGGAAGGAAATCAGAGATAGAGCCTTCAAATTGAAGGAAGAGGCCAAGGTTTGCCTCCTACAAGGTGCCTCTTCATACTCTTCTCTCCAAGCCTTGGTTACTTACATTCTCTCATTCCACTAA 1362 0.464 MSGRKGRRLLLIPLPVQGHINPMLQLAEILHSKGFSITIIHATFNSPDPSNYPHFTFSFFQDGLSQTQPSDLLNFLVEFNVKSVDPFKDCVTKLLRTHEAEEEPVACLISDAICYFTQAVADNLQLPRIVLRTSSISSYVAFLAYPLFRQRGYIPTQACILEEEVEELAPLRVKDLPLIKTEEPEKYYELLSNLLKETKGSLGVIWNSFEGLESPALKKLSKEFSIPMFPIGPFHKYLSSSSSSSSLISQDQSCITWLDTHTPNSVVYVSFGSLAAITETEFVEIGWGLGNSKHPFLWVVRPGLIKGSEWLETLPSGFMENLEGRGLIVKWAPQQEVLAHSAVGAFWSHNGWNSTLESICEGVPMICMPLFTDQKVNARYVSHVWKVGLQLEKKVERGEVERIIRRLMDAKAQGKEIRDRAFKLKEEAKVCLLQGASSYSSLQALVTYILSFH* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1008 453 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 452 - -
Vra3g1008 453 Gene3D Glycogen Phosphorylase B; 252 431 - -
Vra3g1008 453 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 4 450 - -
Vra3g1008 453 CDD GT1_Gtf-like 8 446 IPR002213 GO:0008194
Vra3g1008 453 Gene3D Glycogen Phosphorylase B; 10 446 - -
Vra3g1008 453 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 98 411 IPR002213 GO:0008194
Vra3g1008 453 PANTHER UDP-GLYCOSYLTRANSFERASE 76C2-LIKE 4 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1008 Vra-Chr3 10142551 10145442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1008 1 452 Glycosyltransferase AT3G55700 50.756 1.40e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1008 - - mnt:21389319 589.341