Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0999 ATGGTGCAGGAAATGAAGAGAAATGGACATAAAAGTGAAGAAAAAGAAGAACAGAAATGGGTGCTTGATGATTCTGTTGATTATAAGGGCAGAGTTCCTCTCCGTGCTGCCACCGGTGTATGGAAAGCTTCTCTTTTTGTCCTTGCTGTTTCAACGAGTGAAAGGATAACCTATTTTGGTTTAAGCGGTAATCTCATCATGTACTTGACTAGAGTGATACATCAAGATCTCAAAACAGCAACCAATAATGTAAACTACTGGAAAGGAGCAACAACATTGTTGCCTCTAATTGGGGGCTATGTTGGTGATGCCTACACTGGTAGATTTCGTATGATCCTCTTTTCTTCCCTTTTATACATCAAGGGATTAATCATGCTGACCATGACTCAATTCGTCCCAAGTCTAAAACCATTGAACAATGACATATCAGATCAGACAAATAAGGTTCATGAAGTGGTTTTCTACCTTGGTCTATACAGTTTGGCCTTGGGTACTGGAGGATTCAGACCGTGTTCAATTAGCTTTGGAGCTGATCAATTTGATGATGAGCACCTTGAAGAACGAAAGGAGAAGATGTCTTTCTTCAACTGGATGACCTTTTCATTCAGCTTTGCATTGCTGCTGGGAACAACAGTGATTGTTTACGTTCAGGACTTTGTCAGCTGGGGAGTTGCTTGTCTCGCCCTCGCAATTGTTATGGCCCTAACTACCATTGCTTTTTATTTTGGGATTCCTCTCTACAGGTACAAAATGAAGCCAAAAGAAAACCCTTTATTGCCAATTCTACAAGTTCTAATTGCTGCCGTAAGGAAAAGGAATCTGTCTTGTCCTTCAAATCCTGCGTTATTGTTTGAAGTCCCAGAGTCAGAGAATTCCCAGAGAAGGCTTCTAAGTCATACAAGCAGGTTCAGGTTTCTTGACAAAGCTGCAATAGTGGAAGAGAAGTATACAGAGGAGAAAGAGAATCCGTGGAGATTAGCAACAGTGACAAGAGTGGAGGAGACAAAGCTTATTCTGAATGTTGTTCCCATATGGCTAACTACAGCATTAGTTGGAGTATCTGTAGCATATGGATCAACACTCTTTGTCAAACAATCAGCCGCTATGAACTTAAAGATAAGTAATAGCTTCGAAATCCCACCAGCATCCATGTTGTCCCTTACAGGCTTTGTCACCATGGTGTTTGTCCCAATATATGATAAAATCATTGTTCCAATTCTAAGGAAAGTGACTGGTAATGAAAGAGGCATCAGCATACTTAGGAGGATTGGCATAGGCTTAACATTGTTAATCATAGTCATGGCTTATGCTGCCTTGGTAGAAACAAAGAGACTGAGAATGGTTGGAGATGAAGTGGTAACAGAAGAGGGAACTAAGCAGGAGAGTATGAGTTTGATGTGGATGATACCCCAATTCATTATAATTGGTATTGGAAATGCATTTTATCTAACTGGTTTGCAAGAGTATTTCTATGAGGAAGTTCCTGACTCAATGAGAAGCATAGGAATGGCTTTGTATCTTAGTGGGATGGGAGTAGGATTCTTCTTCAGCAGCTTTCTTTTAATAATCGTCGACTACGTCACGGGGAAGATTGGAAAAACTTGGATTGCAAAGGATGTAAATTCAAGCCGTTTAGATAAACTTTATTGGTTGATGGTTGGATTAAATATTCTAAATTTGGTTTTCTTTGTGTTTATAGCAATGAGGTATACTTATAAGACTGTACACAAGAAAGCTACGGATGATGGTTCCAATGCTGACGGAGTGGAAACACTTCCATGA 1782 0.3996 MVQEMKRNGHKSEEKEEQKWVLDDSVDYKGRVPLRAATGVWKASLFVLAVSTSERITYFGLSGNLIMYLTRVIHQDLKTATNNVNYWKGATTLLPLIGGYVGDAYTGRFRMILFSSLLYIKGLIMLTMTQFVPSLKPLNNDISDQTNKVHEVVFYLGLYSLALGTGGFRPCSISFGADQFDDEHLEERKEKMSFFNWMTFSFSFALLLGTTVIVYVQDFVSWGVACLALAIVMALTTIAFYFGIPLYRYKMKPKENPLLPILQVLIAAVRKRNLSCPSNPALLFEVPESENSQRRLLSHTSRFRFLDKAAIVEEKYTEEKENPWRLATVTRVEETKLILNVVPIWLTTALVGVSVAYGSTLFVKQSAAMNLKISNSFEIPPASMLSLTGFVTMVFVPIYDKIIVPILRKVTGNERGISILRRIGIGLTLLIIVMAYAALVETKRLRMVGDEVVTEEGTKQESMSLMWMIPQFIIIGIGNAFYLTGLQEYFYEEVPDSMRSIGMALYLSGMGVGFFFSSFLLIIVDYVTGKIGKTWIAKDVNSSRLDKLYWLMVGLNILNLVFFVFIAMRYTYKTVHKKATDDGSNADGVETLP* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0999 593 Gene3D MFS general substrate transporter like domains 12 579 IPR036259 -
Vra3g0999 593 Pfam POT family 109 533 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra3g0999 593 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 26 577 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra3g0999 593 SUPERFAMILY MFS general substrate transporter 41 570 IPR036259 -
Vra3g0999 593 PANTHER OS03G0204700 PROTEIN 26 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0999 Vra-Chr3 10043706 10046168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0999 5 591 Organic Solute Cotransporters AT3G53960 47.987 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0999 - - vun:114191162 941.414