Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0998 ATGGAGGAGGAGATTGAGAAGAGAAAGAGAGATGAGAAATGGGTGCATGATGCATCTGTGGATTATAAGAACAGAGTTCCTCTACGTTCTTCCACCGGTGCATGGAAAGCTGCTCTTTTTGTCCTCGTAATTGAGTTTAGTGAAAGGATGTGCTACTTTGGGATATCCAGCAATCTTATCATGTACTTGACTGAAGTGATGCATGAAGACCTAAAAACAGCAACCAAGAACGTAAACTACTGGTTAGGAGCAACAGCATTGATGCCTCTGATTGGAGGATTTGTTGCTGATGCCTACACAGGTCGATTTCATATGATTATCTTTTCTTCCCTCGTATACCTCAAGGGAATAAGCCTGCTGACTATGTCTCAACTCATTCCAAGTCTAAAACCATGCAACAATGAGATATGTGATCGAACAAGGAAGGTTCATGAAGTGGTTTTCTTCCTAGCCCTTTACTGCATCGCCTTGGGTACTGGAGGATTCAGACCGTCCTTACAAAGCTTTGGTGCTGATCAATTTGATGACGATCACCTTGAAGAACGAAAGATGAAGATGTCTTTCTTCAACTGGTGGTCTTTTACACTGTGCTCTGGAATAGTGTCTGGGGCTACGGTGGTTGTCTATGTTCAGGACTTTGTTAGCTGGGGAGTTGCTTTTCTCATTCTCACTATTTGTATGGCTTTAACTATCATTATTTTCTATATGGGGATGCCTTTTTATAGGTACAGGAGGACAGAAGGAAACCCTTTAATGCAAATTCTTCAGGTCCTAATTGCAGCCATTAGGAAAAGGAATTTGATTTGTCCTCTAAATCCTGCTTTATTGCATGAAATCCCAAAGTCGGAGAATTCCCAAGGAAGGCTTTTGAGCCATACCAGCAGACTTAGGTTTCTTGACAAAGCTGCAATAGTTGAAGATACAGAGGAGAAAAAAGAGAATCCATGGAGATTAGCAACAGTGACAAGAGTGGAGGAGACAAAGCTTATTCTGAATGTTGTTCCCATATGGCTAACTACATTAATAATCGGTGTATGCATAGCTCAGAGCCAGACACTGTTTGTAAAACAAGCAGCTGCCATGAACTTAAATATAGGCCACAACTTCAAAATCCCACCAGCTTCCATGGTGTCTGTTACCGCTATTTGCGCTATAATATCTGTCCCAACATATGATAAGATTATTGTGCCACGTCTGAGGAAAGCCACAGGTAACGAAAGAGGCATCAGCATCCTAAGGAGGATTGGCATCGGCTTAACATTGTTACTCTTAGTGATGGTTGTTGCTGCCTTGGTAGAAAGAAAGAGATTAAGAATGGTTGGACATGAAGTTGTGACAGAATGGGGAAAAAAGCATGAGACTATGAGTGTGTTGTGGTTGGTACCCCAATACCTGATGATTGGAATTGGAGGAGATACACTTTCAATAGTTGGTTTGCAAGAGTATTTCTATGACCAAGTTCCTGACTCAATGAGAAGCTTAGGAATAGCTTTATATCTCAGTGTGTTTGGAGTAGGATACTTCTTAAGCAGCTTTCTCATAATAATTGTGGACAATGTAACGGGGAAGAATGGCAAAAGTTGGATTTCAAAGGATATAAATTCAAGCCGTCTAGATATGTTTTATTGGTTGTTGGCCATCATAAATGCTCTAAATTTGTGTCTCTTTATATTTTTGGCAAAAAGGTATACTTATAAGACTGTGCAGAGGAAAACTGGAAATTGA 1725 0.4052 MEEEIEKRKRDEKWVHDASVDYKNRVPLRSSTGAWKAALFVLVIEFSERMCYFGISSNLIMYLTEVMHEDLKTATKNVNYWLGATALMPLIGGFVADAYTGRFHMIIFSSLVYLKGISLLTMSQLIPSLKPCNNEICDRTRKVHEVVFFLALYCIALGTGGFRPSLQSFGADQFDDDHLEERKMKMSFFNWWSFTLCSGIVSGATVVVYVQDFVSWGVAFLILTICMALTIIIFYMGMPFYRYRRTEGNPLMQILQVLIAAIRKRNLICPLNPALLHEIPKSENSQGRLLSHTSRLRFLDKAAIVEDTEEKKENPWRLATVTRVEETKLILNVVPIWLTTLIIGVCIAQSQTLFVKQAAAMNLNIGHNFKIPPASMVSVTAICAIISVPTYDKIIVPRLRKATGNERGISILRRIGIGLTLLLLVMVVAALVERKRLRMVGHEVVTEWGKKHETMSVLWLVPQYLMIGIGGDTLSIVGLQEYFYDQVPDSMRSLGIALYLSVFGVGYFLSSFLIIIVDNVTGKNGKSWISKDINSSRLDMFYWLLAIINALNLCLFIFLAKRYTYKTVQRKTGN* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0998 574 Gene3D MFS general substrate transporter like domains 6 572 IPR036259 -
Vra3g0998 574 PANTHER OS03G0204700 PROTEIN 20 569 - -
Vra3g0998 574 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 20 569 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra3g0998 574 SUPERFAMILY MFS general substrate transporter 23 565 IPR036259 -
Vra3g0998 574 Pfam POT family 104 525 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0998 Vra-Chr3 10039655 10042024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0998 3 569 Organic Solute Cotransporters AT3G53960 54.844 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0998 - - vun:114191162 957.977