Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0996 ATGGAGGGCGAATCTTACACCATAAGCAACACCAGCCATTTGCTCGGTTCTGTTCCCGCTGTCACAGCCGATGAAAAGAGTAGCACAGCTCGTAACGTCCCTTATGCAAGCATGCAAACATTCCCCTTTACCAATGGGGTTGACAAAGGACAGGGATATCAAATTTCTGGAACTCCAACTGCATTTGGGCAACAACCAACAAGCTACTGGGTGAGAATCTTTAGTGTCTCATCCTACATGCAGTATTTCAACGTGGACACGGATGTTGTTGTAAACAGATTGTTGAGTTCCTTGAATCCAGTTGGCGGAGATTTTTTTAACAAGATAGATGCTAATCCTGATTTATACGGGCTAATATGGATCTCAACAACATTGGTTTTTGTACTTGCCTTACTTGGAAATATTGCCACATACCTTACGCAGAAACATGTGGATAACACTACTTCTTGGAGCTTTGATGTCAGCTTCGTTAGCACGGCTGCGTGGTGTATCTATGGTTATGTTATAGTGGTCCCGTTGGCATACTACTTTTTCCTTCAGTATATGGGTTCAAATGCTAACCTTATTCGGTTCTGGTGCATGTGGGGGTATTCCCTCACCATTTTCATTATGTCCTCTTTTCTCTTGCTTGTTCCAGTTGGAATTCTTCGTTGGATCATAATAATCCTTACAGGCGTTGCTTCAGCTAGCTTTGTTGCCTTGAACCTAAGGTCTTTTGTAGAAGGAAATGATGTTTCGGTGGCTGTAATTGCTGCATTTTTCTTGCAAATAGCTTTGGCTGTCTTCATCAAGGTTCGTTTCTTTGGATAA 810 0.4235 MEGESYTISNTSHLLGSVPAVTADEKSSTARNVPYASMQTFPFTNGVDKGQGYQISGTPTAFGQQPTSYWVRIFSVSSYMQYFNVDTDVVVNRLLSSLNPVGGDFFNKIDANPDLYGLIWISTTLVFVLALLGNIATYLTQKHVDNTTSWSFDVSFVSTAAWCIYGYVIVVPLAYYFFLQYMGSNANLIRFWCMWGYSLTIFIMSSFLLLVPVGILRWIIIILTGVASASFVALNLRSFVEGNDVSVAVIAAFFLQIALAVFIKVRFFG* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0996 269 Pfam Yip1 domain 99 263 IPR006977 GO:0016020
Vra3g0996 269 PANTHER PROTEIN YIPF 4 268 - -
Vra3g0996 269 PANTHER UNCHARACTERIZED 4 268 IPR039765 GO:0005794|GO:0016192|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0996 Vra-Chr3 10015054 10021847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0996 K22940 - gmx:100813483 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0996 3 10015054 10021847 Vra6g0659 6 6117810 6121805 PCT