Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0993 ATGGCTCTTTCACCACTCACCATACTTGTGGTCATTGCCACCATCTTCCCCCCATCCATTGCTTTGGCCAAGGATATTGTAGTTGGGGATGATCATGGATGGACAGTAGGCTTTGATTACTCTGCTTGGGCTGCTGATAAGACCTTCTTTGTTGGGGACGTACTTGTATTCAAGTATGCTGTTGGAGAACACAATGTGTTCAAAGTGAATGGAACTGCATTCCAGAGCTGCACGGTTCCTCCACCAAGTGAAGCATTGACTACTGGAAGTGACCGTATTGTATTGGCAATTCCTGGGAGAAAATGGTACATATGTGGTGTTGGAGGTCACTGCAGTGCTGGCCAAAAGCTTGTTATCACAGTTCAACCCCAAACACTACCCCCAACCCTACCACCTGCCCCTGCACCTTCACCTTCTGAGCATGAACCTGGTTTTGGTGGATGGCTGTCTAAGAAGATATTAACCATATTTCATTAA 477 0.4654 MALSPLTILVVIATIFPPSIALAKDIVVGDDHGWTVGFDYSAWAADKTFFVGDVLVFKYAVGEHNVFKVNGTAFQSCTVPPPSEALTTGSDRIVLAIPGRKWYICGVGGHCSAGQKLVITVQPQTLPPTLPPAPAPSPSEHEPGFGGWLSKKILTIFH* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0993 158 CDD Phytocyanin 24 121 - -
Vra3g0993 158 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
Vra3g0993 158 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
Vra3g0993 158 Gene3D - 22 126 IPR008972 -
Vra3g0993 158 PANTHER BLUE COPPER PROTEIN-LIKE 8 131 - -
Vra3g0993 158 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Vra3g0993 158 PANTHER BLUE COPPER PROTEIN 8 131 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0993 Vra-Chr3 9996176 9997139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0993 6 143 Miscellaneous Gene Families AT2G32300 40.000 1.10e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0993 - - gmx:102668784 243.047