Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0989 ATGACTGGCGATTTTCTTCGGACACTGCTCTCTCTCAAGATCGCCGTCTTCTTCTTCATCGCCGTCACCTTCTTCTACTTTGGCAAGCATTGGTCCGATGGCTACAACCAGCTCGTGTTCTTCACCACTCAACGTTCCGACCCAGATCCGAACACGATCCCGGTCGTTACCGTGTCGCCGAATTACGCTAAATCCTTTAACCTCTCCGCCCTTATTGACCATAACATAACCCAACCGGTGCCGGAAAATGTCCCGCCGCCTCCGCCGCCGGAGGCGTCGATCGAGCAAATGGGAATCCTGAACAATAATGGCACGATGACCAATGAGTTCGAGGTGGGGGATTTCGAACCCGGTATGGTGGATCACTGGGTGAACGAGTCCCAGGTTGGGAAGGAAGGTTCTGCTTCTGATTCTGAATTCGGGAGGAAAAAGTTTGGGTTGTGCTCGCGCGAGATGAGGGAGTATATACCTTGTTTGGATAACGAGGACGCGATTCGGAAGCTGCCTTCCACGGAGAAAGGGGAGAGGTTCGAGCGTCATTGCCCCGTGCAAGGTCAAGGGTTAAATTGCTTGGTTCCTGCACCCACTGGATACCGTACTCCCATTCCATGGCCCAGAAGCCGAGATGAGGTATGGTTCAATAATGTTCCTCATACACGTCTTGTTGAAGATAAAGGAGGCCAAAACTGGATTTCTAGAGACAAGGATAAGTTTAAATTCCCGGGAGGTGGCACTCAGTTTATCCATGGGGCAAATGAATACTTGGACCATATTTCTAAGATGATTCCTGAAATTACCTTTGGTCGGCATATACGAGTTGTTCTTGATGTTGGTTGCGGGGTTGCTAGTTTTGGTGCATACTTACTGTCACGGAATGTTGTTACTATGTCTGTTGCTCCCAAAGACGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGTGTACCGGCAATGGCAGCAGCATTTGCAACAAGACGATTGTTGTATCCAAGTCAAGCTTTTGACATGATACATTGCTCACGCTGTAGAGTTAATTGGACTAGAGATGATGGGATACTGCTGCTTGAAGTAAATAGGATGCTAAGAGCAGGAGGGTACTTTGTCTGGGCTGCCCAGCCAGTTTATAAGCACGAAGAAGTTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACAACTCGACTCTGTTGGAATTTTTTGAAAAAGGATGGGTACATTGCAGTATGGCAGAAACCATCTGACAATAGTTGCTATACAAACCGTGAGGCAGGAAGTAAACCTCCACTGTGTGACCCAACTGATGACCCAGACAGTGTTTGGTATGTTGATCTAAAAGCATGCATCTCTGAATTGCCTAAGGACGGATATGGAGCAAATGTCAGTGAATGGCCAGCTCGTTTGCAAGCCCCTCCTGACAGGCTTCAAAGCATACAGCTAGATGTTTTCTCATCCAGAACTGAGCTATTCAAGGCAGAATCTAGATATTGGAAGGAAATAATAGCAAGTTACGTTCGTGCTTTACACTGGAAAAAGATCAGACTAAGAAATATTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTGAGCAGAATTTTGAAAACTGGGTTATGAATGTTGTTCCTGTTAGTGGCCCAAACACTCTTCCAGTTATATATGACCGTGGTTTGATTGGAGTTATGCATGACTGGTGCGAGGCATTTGACACCTACCCAAGAACGTATGATTTATTGCATGCTGCCAACCTCCTTTCTATTGAGAGGAAAAGATGCAATCTCTCATCCATTATGCTTGAGATGGATCGCATACTAAGACCTGGTGGACATGTATACATCCGTGATTCTCTTGAAATTATGGATGAACTTCAAGAGATTGGCAAGGCAATAGGCTGGCATGTGATGTTGCGAGACACAGAGGAGGGGCCTCATACAAGTTCTATGCTATTGGTTGGTGAGAAGCACTTACTACGCTCCTGA 1989 0.4615 MTGDFLRTLLSLKIAVFFFIAVTFFYFGKHWSDGYNQLVFFTTQRSDPDPNTIPVVTVSPNYAKSFNLSALIDHNITQPVPENVPPPPPPEASIEQMGILNNNGTMTNEFEVGDFEPGMVDHWVNESQVGKEGSASDSEFGRKKFGLCSREMREYIPCLDNEDAIRKLPSTEKGERFERHCPVQGQGLNCLVPAPTGYRTPIPWPRSRDEVWFNNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGANEYLDHISKMIPEITFGRHIRVVLDVGCGVASFGAYLLSRNVVTMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDMIHCSRCRVNWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEVLEEQWEEMLNLTTRLCWNFLKKDGYIAVWQKPSDNSCYTNREAGSKPPLCDPTDDPDSVWYVDLKACISELPKDGYGANVSEWPARLQAPPDRLQSIQLDVFSSRTELFKAESRYWKEIIASYVRALHWKKIRLRNIMDMRAGFGGFAAALIEQNFENWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEAFDTYPRTYDLLHAANLLSIERKRCNLSSIMLEMDRILRPGGHVYIRDSLEIMDELQEIGKAIGWHVMLRDTEEGPHTSSMLLVGEKHLLRS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0989 662 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 154 657 IPR004159 GO:0008168
Vra3g0989 662 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 479 637 IPR029063 -
Vra3g0989 662 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 190 392 IPR029063 -
Vra3g0989 662 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 12 659 IPR004159 GO:0008168
Vra3g0989 662 Gene3D Vaccinia Virus protein VP39 251 417 IPR029063 -
Vra3g0989 662 PANTHER METHYLTRANSFERASE PMT12-RELATED 12 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0989 Vra-Chr3 9940922 9945956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0989 - - gmx:100800414 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0989 3 9940922 9945956 Vra6g0666 6 6184187 6189847 PCT