Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0988 ATGTGCATTGAGAAGCCACCTGCATTAGCTAGAGTTGCTGGTGGTTCTAGCTCTTCTTTCATTTGCTGGGGATACTTCTCCAAGGCTTTTGAAATCCTCGTAGATTGTGATCCTCTTGCCTTCATATTTTTCCATTTGGTGTTGCAAACCATTATTGCAGACTGTCTCATTATCGACTGCACTCTGATCTTTTTCGGGGCAAGAATGACTACACATAATGTGTTGGATATTGCTTTAAATGATATACTTCGGGTGGTCACACCATTACAAGAAGATTGGAACATACGATTTGCAATTATTAACGACATAAGAAGCATTGTTGAATCTGTGGAAAGCTTGAGAGGAGCAACTGTTGAGCCATTTGGGTCATTTGTATCTAATCTCTTCACCCGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATCTGCTGGGAAAAAACAAAAACAAACTTTATTGGGGGAAGTTTTAAAAGCTTTGAGAATGAAAGGTGGAGGGAGCAACTTGCAGTTCATCCCCAATGCACGAGTTCCCATTTTAAAATTTAGAAGCTACCGTCAGGGTGTATCTTGTGATATTTCAATTAATAACCTGCCAGGCCAAATGAAATCCAAGATTTTGCTTTGGATGAACAAGATAGATGGCCGCTTTCATGATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCACACAAAATCAATAACTCTAAAGCTGGAACTTTCAACTCCTATTCCCTAAGTTTACTTGTTATATTTCATTTTCAGACATGTGTTCCTGCAATCTTACCACCACTCAAATATATATACCCTGGCAACATGGTTGATGATCTTAAAGGGGTTAGAGCTGATGCTGAGAACCGTATCACCGAAACATGTAATGCTAGTATAAACCAGCACATATCAAACAAGGGAAGGTCAATTAATAAAAAGTCCGTGCGTGATCTTTTTGTTGAATTCTTAGGAAAGTATGCTCAGATGGATTCATGGGCGTCAAATTTGGGAATTTGCCCGTACACTGGACAATGGGAGCAGATAGAGAACAACACGATTTGGTTACCCAAGACTTACGCTATATTTGTTGAGGATCCCTTTGAGCAGCCGCAAAATACTGCGAGATCTGTCAGTGCAGGACAACTGAAGAAGATAAGCGAGGCCTTTTCAAAATCGTACTCCTTTTTTTCCTCGAACAATCATAATCTGAATTCACTTTTGACCATGTTAGCGCCACCACATGTAGTAAAATCTATCACAGGTATTCAAAATTACAACGGAAGTTACTTTCACCCAACTCAGCCAAAAGTACAGAGAGTTATGCGCCCTCCACCGCAGTTACAACATTTTCAATATGCCAGTCCAGGAACAAGCTCCAAGAGTTCAGCTTCAAATGGACATATGCAGATGCCCAGAGGAACAAACTTTAGCATTCCATCTTCAAATGGACATATGCAGATGCCTAGAGGAACAAACTTTAGCATTCCATCTTCAAATGGGTATATTCAGATGCCTAGAGGAACAAGCTTCAACATCCCATCTTCTTATGGGCATATGCAAATGCCTAGAGTAACAAGCTTCAACATTCCACCTTCAAATGGGCATATACAGATGCCTAGAGGAATAAGTATCAGCAGTTCATCTTCAAATGGGCATATACAGAACCCTAGAGAAACTAAGAAGCCCAGAGAAACCAACTTCAACAGTGCATCTTCAAATGGACATGTACCGGTGAATAAAGGCCAGCAGATGTGGAGGCCAAAGAGTTAA 1779 0.4042 MCIEKPPALARVAGGSSSSFICWGYFSKAFEILVDCDPLAFIFFHLVLQTIIADCLIIDCTLIFFGARMTTHNVLDIALNDILRVVTPLQEDWNIRFAIINDIRSIVESVESLRGATVEPFGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQTLLGEVLKALRMKGGGSNLQFIPNARVPILKFRSYRQGVSCDISINNLPGQMKSKILLWMNKIDGRFHDMVLLVKEWAKAHKINNSKAGTFNSYSLSLLVIFHFQTCVPAILPPLKYIYPGNMVDDLKGVRADAENRITETCNASINQHISNKGRSINKKSVRDLFVEFLGKYAQMDSWASNLGICPYTGQWEQIENNTIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKISEAFSKSYSFFSSNNHNLNSLLTMLAPPHVVKSITGIQNYNGSYFHPTQPKVQRVMRPPPQLQHFQYASPGTSSKSSASNGHMQMPRGTNFSIPSSNGHMQMPRGTNFSIPSSNGYIQMPRGTSFNIPSSYGHMQMPRVTSFNIPPSNGHIQMPRGISISSSSSNGHIQNPRETKKPRETNFNSASSNGHVPVNKGQQMWRPKS* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0988 592 MobiDBLite consensus disorder prediction 453 509 - -
Vra3g0988 592 Pfam Nucleotidyltransferase domain 103 160 IPR002934 GO:0016779
Vra3g0988 592 CDD NT_PAP_TUTase 95 215 - -
Vra3g0988 592 MobiDBLite consensus disorder prediction 528 592 - -
Vra3g0988 592 Gene3D - 220 396 - -
Vra3g0988 592 MobiDBLite consensus disorder prediction 568 582 - -
Vra3g0988 592 PANTHER POLY A POLYMERASE CID PAP -RELATED 69 546 - -
Vra3g0988 592 SUPERFAMILY Nucleotidyltransferase 73 215 IPR043519 -
Vra3g0988 592 MobiDBLite consensus disorder prediction 528 558 - -
Vra3g0988 592 Gene3D Beta Polymerase, domain 2 99 219 IPR043519 -
Vra3g0988 592 SUPERFAMILY PAP/OAS1 substrate-binding domain 222 410 - -
Vra3g0988 592 PANTHER PROTEIN HESO1 69 546 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0988 - - vra:106756804 1160.59