Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0985 ATGGCTGAGTTGGAAGAAAGCAGCAGTAAGAGAGGAGGAAGATGGTGTCTGAAGGGAATGACGGCTCTGGTCAGTGGTGGCACTCGTGGGATCGGGCACGCCATTGTGAGTGATTTGGCCGCGTTTGGCGCCGCTGTGCACACTTGTTCCAGGACCCAAACAGAGCTCAACAAGTGCTTAGAAGAATGGCAGAGTGAAGGCTTTCAGGTTACTGGATCGGTGTGTGACGTGTCCTCGCCACACGACAGAGAGAATCTTCTTCAGAAAGTTGCATCCACCTTCAATGGAAAGCTTAACATCTATGTAAACAACGTTGGAACAAACTTCAGAAAACCAACAATTGAGTACAGTGCTGAAGAATATTCAGAGCTGATGACAGTTAATTTAGACTCCTCATTTCATCTGTGTCAACTTGCGTACCCTCTTCTCAAAGCATCTGGAAAGGGATGCATTGTGTTCCTTTCTTCTGTTGCTGGTGTCACCAGCATGGGTACTGGATCTGTTTATGCAGCAAGCAAAGCCGCAATTAATCAGCTTACAAAAAATTTGGCCTGTGAATGGGCAAAAGACAACATAAGAAGCAACTGTGTTGTACCATGGACGACCAGAACTCCACTTATCCAACATCTGCTCCAAAATCAAGCTTTTGTGGATGATGTGATGTCACGTACCCCACTTAAGCGGATCGCAGAACCGGAAGAAGTGTCATCTTTGGTGACTTTCCTCTGCTTGCCTGCTGCATCGTATATCACTGGACAAGTTATTTGTGTTGATGGAGGAGTTACTGTTAATGGATTTCAACCCAGCATGAGAATTACTTGA 822 0.4586 MAELEESSSKRGGRWCLKGMTALVSGGTRGIGHAIVSDLAAFGAAVHTCSRTQTELNKCLEEWQSEGFQVTGSVCDVSSPHDRENLLQKVASTFNGKLNIYVNNVGTNFRKPTIEYSAEEYSELMTVNLDSSFHLCQLAYPLLKASGKGCIVFLSSVAGVTSMGTGSVYAASKAAINQLTKNLACEWAKDNIRSNCVVPWTTRTPLIQHLLQNQAFVDDVMSRTPLKRIAEPEEVSSLVTFLCLPAASYITGQVICVDGGVTVNGFQPSMRIT* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0985 273 Pfam Enoyl-(Acyl carrier protein) reductase 28 262 - -
Vra3g0985 273 Gene3D - 12 265 - -
Vra3g0985 273 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Vra3g0985 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 263 IPR036291 -
Vra3g0985 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 IPR002347 -
Vra3g0985 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
Vra3g0985 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Vra3g0985 273 PANTHER TROPINONE REDUCTASE 5 270 IPR045000 GO:0016491
Vra3g0985 273 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 5 270 - -
Vra3g0985 273 PRINTS Glucose/ribitol dehydrogenase family signature 21 38 IPR002347 -
Vra3g0985 273 PRINTS Glucose/ribitol dehydrogenase family signature 96 107 IPR002347 -
Vra3g0985 273 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Vra3g0985 273 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Vra3g0985 273 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Vra3g0985 273 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0985 Vra-Chr3 9900642 9902161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0985 14 268 Miscellaneous Gene Families AT2G29290 61.868 1.45e-118 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0985 K08081 - gmx:100791265 489.96