Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0979 ATGGAGAAGATGTGTCACACTCGCTTGGAACTTTGTCACGAGTATTCTCTTAAAGCATCCAGAGTATCTTTTATCCCTGAAAGACTTGGTGATATTGTTATACTCTTAATAAGGTTTGGTATACTTGTGTGCCTTGTTGCCTCCATATCACTCGCTCTCCACTCAGCATTTGCTAAACCAGACCGATGGTTCCCCTTACCGGAGCATATACATACTGTACAGAATACTTCTGTCATTGACAGCGGACCGACAAACATCTCTCATATTCTGTTTGGCATCGGTGGGTCATCTAACACTTGGCATGACCGCAGCAACTACAGCAAACTATGGTGGAATCCAAACACCACAAGAGGTTTTGTTTGGCTTGACAAGAAGCCTAAGATTCTGCGTGATGACATGCTTGTACCATATCAAATCTCAAAGGGCTGGAAACGGTTCCAGTATGTGCATTCAGCGTCTGCAGTTCGGATTTCCCGGATAGTTCATGAGAGCTTTAAACTTGGTTTGCCAAATGTTCGGTGGTTTGTAATGGGAGATGATGATACTGTGTTCTTTACTGAGAACTTAGTTACTGTGTTGAGAAAATATGATCACAACCAGATGTATTATATTGGTGGGAGTTCTGAGAGTGTTGAGCAAGATTTGATGCATTCTTATGACATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCTGCTCAACTAGCCAAAATAATGGATGGTTGTCTAAGCAGATACTACTACTTTTATGGTTCTGATCAAAGGGTTTGGGCCTGTGTGAATGAAATTGGGGTGCCTCTTACCAGAGAAGGTGGATTCCACCAGCTTGACATAAGAGGGGATCCATATGGTCTTCTAGCTGCACACCCTTTGGTACCACTTGTATCTCTCCATCACCTTGACCAATTGAACTCCTTGTTTCCAAACCAGACTCAATTTCACTCAATGGAAAAGCTCGTCAGTGCATACCACGTTGACCCTGCCCGGACAGTGCAGCAAAGTTTTTGCTATGATCATAAGCATAGATGGTCAATATCCATCTCATGGGGTTACACCATACAAATATATCCATTTTTGTTGATAGCATCAGACTTGCAGATGCCATTGCAGACATTTAGGACTTGGCGAAGTTGGAAAGACGGCCCCTTCACATTCAATACGAGACCAATGAGCTCTGACCCGTGTCAGAAGCCAGCTGTGTTTTTCCTGGATGAGGTTACAGAAGTGGGAAAAAGTGGAAGTGTCACTATCTACAAGAGACATGAAGGCAGTGAAGGGAAGTGCACGAGAGAAGGCATTACTAACGTGGAAGTGGAAAGCATTACAGTTTCTGCCTTGAAGCTGGACCCAGAATATTGGAAAAGTGTATTGCGCAGGCATTGCTGCCAATCATTGGCGGGTGGAAGCATAAACAATGGTAGTATGCATATCAGGATTAGGAAGTGCAGACCTCAAGAAACCATTACTATTTAG 1482 0.4345 MEKMCHTRLELCHEYSLKASRVSFIPERLGDIVILLIRFGILVCLVASISLALHSAFAKPDRWFPLPEHIHTVQNTSVIDSGPTNISHILFGIGGSSNTWHDRSNYSKLWWNPNTTRGFVWLDKKPKILRDDMLVPYQISKGWKRFQYVHSASAVRISRIVHESFKLGLPNVRWFVMGDDDTVFFTENLVTVLRKYDHNQMYYIGGSSESVEQDLMHSYDMAFGGGGFAISYALAAQLAKIMDGCLSRYYYFYGSDQRVWACVNEIGVPLTREGGFHQLDIRGDPYGLLAAHPLVPLVSLHHLDQLNSLFPNQTQFHSMEKLVSAYHVDPARTVQQSFCYDHKHRWSISISWGYTIQIYPFLLIASDLQMPLQTFRTWRSWKDGPFTFNTRPMSSDPCQKPAVFFLDEVTEVGKSGSVTIYKRHEGSEGKCTREGITNVEVESITVSALKLDPEYWKSVLRRHCCQSLAGGSINNGSMHIRIRKCRPQETITI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0979 493 Pfam Protein of unknown function, DUF604 213 465 IPR006740 -
Vra3g0979 493 PANTHER BNAA05G27650D PROTEIN 13 491 - -
Vra3g0979 493 Gene3D - 79 344 - -
Vra3g0979 493 PANTHER FRINGE-RELATED 13 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0979 Vra-Chr3 9854224 9861412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0979 13 491 Glycosyltransferase AT3G11420 53.722 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0979 - - gmx:100802549 855.514