Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0973 ATGGCTGCCTCCGTCTCCACTGTCGGAGCTGTCAACAGAGCTATTTTGAACCTGAATGGATCAGGAGCAGGAGCTTCAGCTCCCACTTCAGCTTTCTTTGGCACAAGCTTGAAGAAGGCTGTTGCCTCAAGGGTCCCTAACAGCAAGGTGACGAATGGAAGCTTCAAAATTGTTGCTGCTGAGAAAGAGATTGAGGAGAGCCAGCAGACCAACAAGGACAGATGGAAGGGTCTGGCCTACGATATCTCTGATGACCAACAAGACATCACAAGGGGGAAGGGTATGGTTGATCCTCTTTTCCAAGCTCCAATGGATGCTGGAACACACTATGCCGTCATGAGCTCCTACGAATACCTTAGCACTGGACTCCGACAGCTTGACAACATAAAGGATGGTTTCTACATTGCTCCTGCTTTTCTGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCTTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAGGGACAAGGAAAGTCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCCGGAGAGCCAGCAAAATTGATCAGGCAGAGATACCGTGAAGCTGCAGATTTGATCGCCAAGGGAAAGATGTGTGCTCTATTCATCAACGATCTTGATGCAGGAGCAGGTCGTCTTGGTGGAACCACCCAATACACTGTGAACAACCAGATGGTGAATGCCACTCTCATGAACATTGCTGATAACCCTACAAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGAGAACGCCCGTGTGCCCATCATTGTCACCGGTAACGATTTCTCAACGCTGTATGCTCCTCTCATTCGTGATGGGCGTATGGAGAAGTTCTACTGGGCACCAACAAGGGACGACCGCGTTGGTGTTTGCAAGGGAATTTTCCGCACCGATGGTGTTCCTGAAGAGGACATTACAAAGCTTGTTGACACCTTCCCAGGCCAATCTATTGATTTCTTTGGTGCACTGAGGGCCAGAGTGTATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGATGCTATTGGGAAGAAGCTTGTGAACTCAAAGGAAGGACCTCCTACCTTTGATCAGCCCAAGATGAGTCTGGACAAGCTCTTGCAGTATGGTAACATGCTTGTCCAAGAACAAGAAAATGTGAAGAGAGTCCAATTGGCTGACAAGTACTTGAATGAGGCTGCTCTTGGAAATGCTAACGAAGATGCTATTAAGAGTGGATCTTTCTTCAAATAG 1320 0.4758 MAASVSTVGAVNRAILNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDAIGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFFK* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0973 439 Gene3D - 125 309 IPR027417 -
Vra3g0973 439 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 438 - -
Vra3g0973 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 341 IPR027417 -
Vra3g0973 439 Gene3D - 310 422 - -
Vra3g0973 439 Pfam ATPase family associated with various cellular activities (AAA) 165 306 IPR003959 GO:0005524|GO:0016887
Vra3g0973 439 PANTHER - 1 438 IPR044960 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0973 Vra-Chr3 9804888 9808197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0973 - - gmx:100797222 805.053