Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0971 ATGGGTTCGAATCTGGAACCGGTGCCAATTACATCCCAGAAACATGACCCGGCATGGAAACATGTTCAGATGTTTAAGAATGGGGACAAGGTGCAACTGAAGTGCATATATTGTCTGAAGATGTTCAAGGGTGGTGGGATTCATAGGATTAAGGAACACCTTGCTTGCCAGAAAGGGAATGCATCCACTTGCAGCCGTGTCCCCCATGATGTCAGGCTTCACATGCAGCAGAGTTTGGATGGGGTTGTGGTGAAGAAGAGGAGGAAGCAGAAGATCGAGGAGGAGATTATGAATGTTAATCCTTTGTCCACTGTTGTGAACTCGCTTCCCAATAATAACCAGGTTGATGTCAATCAGGGGGTGCTTGCCATTGGAGTGGACCACAATTCAAGTTTTGTAGTGAATCCTGGAGAAGGAATGAGTAAGAATATGGAAAGGAGGAAGAAGATGAGAGCTAGTAAGAATCCTGCAGCAATTTATGCAAACTCGGAGGGTGTTGTTGCTGTGGAGAAGAACGGACTGTTTCCCAAAAGAGGGGACAATCACATTCATATGGCGATTGGTAGGTTTTTGTATGACATTGGTGCACCTTTTGATGCGGTGAACTCAGTCTATTTTCATGAAATGGTTGATGCAATTGCTTCAAGGGGTGCGGGTTTCGAACGGCCCTCGCATCATGAACTTCGGGGTTGGATCCTGAAGAACTCTGTGGAGGAAGTGAAGAATGATATAGATAGATGCAAGATGACTTGGGGGAGGACTGGCTGTTCCATTTTGGTTGATCAATGGACAACAGAATCTGGGAGAGTACTGACGAGCTTTTTGGCTTATTGTCCTGAAGGCATTGTCTTTTTGAAATCTTTGGATGCAACTGAGATTTCAACTTCTGCAGATTTTCTGTATGACATGATAAAACAAGTGGTAGATGAAGTTGGAGTCGGGCAAGTGCTGCAAGTGATTACGTCTGGTGAAGAACAATATGCTATTGCTGGTAGACGGCTGACAGACACTTTTCCCACCCTTTATTGGAGCCCTTCTGCTGCTCGTTGCATTGATTTCATTCTTGAAGATTTTGGAAATCTTGAGTGGATTAGTGCAGTCATTGAACAAGCTAAATCTGTAACAAGATTTGTGTACAATTACAGTGCAATTTTAGTTATGGTTAAAAGGTATACCTTAGGGAATGATATTGTGGATCCATCTTTTTCACAATTTGCTACGAACTTTTCCACATTGAAACGGATGGTTGATCTTAAACACAATTTACAGGCCTTGGTGACTTCTCAGGAGTGGGCAGACTGCCCATATTCGAAGAAATCAGCAGGGCTTGAAATGTTAGATTGTCTAAGCAGTCAAACATTTTGGTCCTCGTGTGACATGATTGTTCGTCTAACAACCCCTCTCTTAAAAGTTCTGAGAATAGCTAGTAGTGAGATGAGACCTGCAATGGGATACATTTATGCTGGAATGTACCGGGCAAAAGAAGCAATTAAAAAGGCACTTGGTAAGAGGGAGGAGTATATGGTGTACTGGAATATTATACATCATAGATGGGAAAGGCTGTGGCATCATCCTCTTCATTCTGCTGGATTCTACCTTAATCCAAAGTTCTTTTATAGTATTCAAGGAGATATACACAGTCAGATTGTCTCAGGAATGTTTGACTGCATAGAGAGATTGGTACCTGATACAAGAATCCAAGATAAAATTATCAAAGAGATAAATTTGTACAAGTCTGCTGCGGGCGACTTTGGGAGAAAGATGGCAGTTAGAGCAAGAGATAATCTGCTTCCTTCTGAATGGTGGTCAACATATGGAGGAGGCTGCCCAAACTTATCACGATTAGCAATTCGTATTCTCAGCCAAACATCCAGTATGATGTCCTGGAAGAGAAACCAGATTCCTTTTGAACAAATAGTCAACACAAGGAATTACATAGAGCGCCAACACCTTACCGATCTTGTCTTTGTTCACTGCAATTTACGGTTAAGACAAATGTTTGTGAGCAAAGACCATGATTTTAGTGACCCTTTATCATTTGACAGCATTAGTTATGTTGATGAGTGGATTAGGCCAAGGGATTTATACACAGACGAGTATGGGAACTCAGATTGGATGACACTGGATCCATCGTCAGTTAACACTATGCTTTTAAGGCCTTTAAATGATGAAGCTGAAGAATTGGGTGAAGGGTTTGATGATGATGAAATTTTCAGTTGTGGGAAAGATAGCGAGGATGAAAACACTGTTGAAAAGTTGGTAAATCAATAG 2271 0.4183 MGSNLEPVPITSQKHDPAWKHVQMFKNGDKVQLKCIYCLKMFKGGGIHRIKEHLACQKGNASTCSRVPHDVRLHMQQSLDGVVVKKRRKQKIEEEIMNVNPLSTVVNSLPNNNQVDVNQGVLAIGVDHNSSFVVNPGEGMSKNMERRKKMRASKNPAAIYANSEGVVAVEKNGLFPKRGDNHIHMAIGRFLYDIGAPFDAVNSVYFHEMVDAIASRGAGFERPSHHELRGWILKNSVEEVKNDIDRCKMTWGRTGCSILVDQWTTESGRVLTSFLAYCPEGIVFLKSLDATEISTSADFLYDMIKQVVDEVGVGQVLQVITSGEEQYAIAGRRLTDTFPTLYWSPSAARCIDFILEDFGNLEWISAVIEQAKSVTRFVYNYSAILVMVKRYTLGNDIVDPSFSQFATNFSTLKRMVDLKHNLQALVTSQEWADCPYSKKSAGLEMLDCLSSQTFWSSCDMIVRLTTPLLKVLRIASSEMRPAMGYIYAGMYRAKEAIKKALGKREEYMVYWNIIHHRWERLWHHPLHSAGFYLNPKFFYSIQGDIHSQIVSGMFDCIERLVPDTRIQDKIIKEINLYKSAAGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSMMSWKRNQIPFEQIVNTRNYIERQHLTDLVFVHCNLRLRQMFVSKDHDFSDPLSFDSISYVDEWIRPRDLYTDEYGNSDWMTLDPSSVNTMLLRPLNDEAEELGEGFDDDEIFSCGKDSEDENTVEKLVNQ* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0971 756 Pfam Protein of unknown function (DUF 659) 223 374 IPR007021 -
Vra3g0971 756 SUPERFAMILY Ribonuclease H-like 256 663 IPR012337 -
Vra3g0971 756 Pfam hAT family C-terminal dimerisation region 582 660 IPR008906 GO:0046983
Vra3g0971 756 PANTHER OSJNBA0013A04.12 PROTEIN 7 730 - -
Vra3g0971 756 ProSiteProfiles Zinc finger BED-type profile. 13 71 IPR003656 GO:0003677
Vra3g0971 756 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0971 Vra-Chr3 9794389 9798300 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0971 - - gmx:100817502 1408.28