Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0956 ATGGGAAACGCTATGGGGAGAAAAAGAGCAAAGGTGATGAAAATAGATGGTGAAACGTTCAAGCTCAAGACTCCGGCTAGAGCAAACGACGTCGTTAAAGACTACCCCGGTCACGTTCTGCTGGACTCTCAAGCGGTAAAAAACTTCGGGCCCCGGGCCAAGCCCTTGGAGCCCGACCATCAGCTCAGACCCAAGAAGCTTTATTTCTTGGTGGAGTTGCCGAAGGTTCGGCCCGAGCCACTGACGAGGAGGGCGCGATCAAGTGGGATCCGTGGCATGAACGCCAAGGATAGGCTTGATTTCTTGATGCTGTCGAAACGTTCCGTTTCGGACCTCGCCGTGGTGAAGCATGGGCCGGGCCCAGACAGTAGTAGTGGGCCCACGAGGGTGAGAATGAGAGTGCCCAAGGCCCAGTTGGAGAGGCTCATGGAGGAGAGCCAGGACGGGGGCGAGGTGGCGGAGAAGATCTTAAGTTTGTACATGGGGAACAATGCTGCCGCCGTGGATGGTGGCGCAACGGTGGTGGAGGCCCAAAAGGAGCTTCCCAATCGGAAACCACAAAGGAAAAGGGTGAGTTTCAGTCCAGTAGAACAAGGAGAAATTCATGAGGAATCAGCAGCACCTCAAAAGTCACTTGTCTATACCAGCCCTTCCAGATAG 660 0.547 MGNAMGRKRAKVMKIDGETFKLKTPARANDVVKDYPGHVLLDSQAVKNFGPRAKPLEPDHQLRPKKLYFLVELPKVRPEPLTRRARSSGIRGMNAKDRLDFLMLSKRSVSDLAVVKHGPGPDSSSGPTRVRMRVPKAQLERLMEESQDGGEVAEKILSLYMGNNAAAVDGGATVVEAQKELPNRKPQRKRVSFSPVEQGEIHEESAAPQKSLVYTSPSR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0956 219 Pfam PADRE domain 1 183 IPR025322 -
Vra3g0956 219 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN 1 204 - -
Vra3g0956 219 MobiDBLite consensus disorder prediction 181 197 - -
Vra3g0956 219 MobiDBLite consensus disorder prediction 179 219 - -
Vra3g0956 219 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0956 Vra-Chr3 9584006 9587490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0956 - - gmx:100819441 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0956 3 9584006 9587490 Vra6g0702 6 6644332 6646308 PCT