Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0953 ATGGCTTCTCCAACACTGAGTTTGAGGCCTCAAAAGTCTAAAATAGTGCTCTTCCTTATCTGCATTTCATTTTCATATTCAGTTGAAGAAGTCATAACATCATCTAACAAGTTAGACCAACCACTGTTTCCCCCACCAGCAGAGACTGAAATCAAGTGTGGATCATGTCCTTGTGGAGACACCTGTGGTGAGCAACTTCCACCACCCCCACCATCAACTCCACCTCCTTGTCTATCTCCACCGCCACCACTACCATCGCCACCACCTCCGCCACCACCGTCGCCACCGCCTCCTCCTAAGTATCCCACATGTCCTCAGAACTGCAACCCCTTGCCGCCGCCACCGCCGCCAAGATTCGTATACGTGCCTGTGCCAGGTGTTCCAAAACCATATACTTGGGTATATTACTACTCTGGTGCTGAAAACAGAGCTGTGGGATTGCTTGTTTTGGCTGGTTTGGGAGGAATATCATTGGCAACGCTACTTTTGGATGACATCATGAAGCTAAATCTATACTTCTGA 522 0.4866 MASPTLSLRPQKSKIVLFLICISFSYSVEEVITSSNKLDQPLFPPPAETEIKCGSCPCGDTCGEQLPPPPPSTPPPCLSPPPPLPSPPPPPPPSPPPPPKYPTCPQNCNPLPPPPPPRFVYVPVPGVPKPYTWVYYYSGAENRAVGLLVLAGLGGISLATLLLDDIMKLNLYF* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0953 173 MobiDBLite consensus disorder prediction 64 104 - -
Vra3g0953 173 PANTHER PROTEIN, PUTATIVE-RELATED 1 166 - -
Vra3g0953 173 PRINTS Proline rich extensin signature 71 92 - -
Vra3g0953 173 PRINTS Proline rich extensin signature 92 108 - -
Vra3g0953 173 PRINTS Proline rich extensin signature 113 130 - -
Vra3g0953 173 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0953 Vra-Chr3 9575311 9575832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0953 - - gmx:102666273 192.2