Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0930 ATGTTCCTGCGTGTGGCTGCAGCAAATTTGCTGAAAAAACTTCGGTTTCCTGCTTCTTATGCCTCCCCTGCCTCCACAGTAACCACCACAAATGAACTTTCCGTTAAGCTCAAACTTCCCCGTTGGTACCAAACTGGTGGACATGGTTGGAGGATAAATCTTAGGGATCCCTGTTTATGGATTGTTATATCTGGACATGTAGCAATGACTTTAGGAATTAGTGCCAACGCCACATTTGCAGAAAATGCGACAACTGAAGCATCTTCTAACAATGACCTGGGAGATGACTTAGTTGGCTTGAGAAAGATTGAGGATGGTTCTGTCGTATCAAACATACATACAGCAAAATGGAGAGTCTTTACTGATAAAGCGAGAGAATTTTTTCAGCAGGGAAAACTAGATGAAGCTGAAAAACTCTTCCTTTCTGCTATACAAGAAGCTAAAGAAGGTTTTGGCGAGCAAGATCCGCATGTTGCTTCTGCATGCAACAATCTGGCAGAATTTTACAGGGTCAAAAGGGCATTTGATAAAGCAGAGCCATTGTATTTGGAAGCCATCAATATATTAGAGGAATCTTTTGGTCCTGATGATGTACGGGTTGGAGTTGCTGCTCACAACCTTGGGCAGTTCTACCTTGGACAGAAGAAATTGGAAGAAGCCCGGGTTAAGTACGAGCGCGCCTTGAAGGTGTTGTATCTTCAAGGAAAAGAAAGGGATGCTGAGGTCCTTATTAAGGACTCTATAAGAATGCTGGAGGAAGGTGGTGAAGGGGAGTCATCTGTATGCATTAGAAGACTACGTTACCTCTCACAGATATATATGAAGTCACATCAAGTTGCTGAAGCTGAGATGGTTCAGAGAAAGATCCTGCATGTTATGGAATTGTCAAAGGGATGGAATTCCTTGGCTACAGTTATTGCAGCCGAATCTCTGGCTTTGACCCTGCTAGCATCTGGCAATACAAAAGATTCAAAAGATCTTCTTGAAAGATGTCTTAATGCCAGGAAGGACTTGCTTCCCAGTGATCATATTCAGATTGGTGCAAACCTACTTCATCTAGCGAGAGTGGCAATGCTTGACTGCGGTCGACATAAAATGTTGGATGTTTCTAAAGCTGAAGCTGAGCTTGACATGGCAAAGAATCATTTGCATAATTCCATAAGGATTGCACGTGAATGTTTACGGAAGGTATCAAAACAAAAGGACAAGTTAAAGAGATACAGTGAGCCCGGGGATTCTAGAAAGGAAGGCCAAGCAGCATTGGCCATATTGTTGCAATCGCTCAATACATTGTCATCAGTAGAGCTAGAAAAGCAAGAATTGCAGAAGATTCAGGAAGGGAATATTAACCTCGAGGCTCAGGAGGCACTTCTTCAATGCATTTCTGCTTACAAAGAGTTTGTATCAGAGAGGTCAATTGCCGATACCCCTGAAATAAAGAACGAGTATCTTTCATGTTTGAAGCGCGCACAAAATTTGCTTGGACATAAAATTCATTAG 1500 0.4233 MFLRVAAANLLKKLRFPASYASPASTVTTTNELSVKLKLPRWYQTGGHGWRINLRDPCLWIVISGHVAMTLGISANATFAENATTEASSNNDLGDDLVGLRKIEDGSVVSNIHTAKWRVFTDKAREFFQQGKLDEAEKLFLSAIQEAKEGFGEQDPHVASACNNLAEFYRVKRAFDKAEPLYLEAINILEESFGPDDVRVGVAAHNLGQFYLGQKKLEEARVKYERALKVLYLQGKERDAEVLIKDSIRMLEEGGEGESSVCIRRLRYLSQIYMKSHQVAEAEMVQRKILHVMELSKGWNSLATVIAAESLALTLLASGNTKDSKDLLERCLNARKDLLPSDHIQIGANLLHLARVAMLDCGRHKMLDVSKAEAELDMAKNHLHNSIRIARECLRKVSKQKDKLKRYSEPGDSRKEGQAALAILLQSLNTLSSVELEKQELQKIQEGNINLEAQEALLQCISAYKEFVSERSIADTPEIKNEYLSCLKRAQNLLGHKIH* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0930 499 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 495 - -
Vra3g0930 499 Coils Coil 434 454 - -
Vra3g0930 499 Pfam Tetratricopeptide repeat 160 230 - -
Vra3g0930 499 SMART tpr_5 201 234 IPR019734 GO:0005515
Vra3g0930 499 SMART tpr_5 159 192 IPR019734 GO:0005515
Vra3g0930 499 SMART tpr_5 305 338 IPR019734 GO:0005515
Vra3g0930 499 SMART tpr_5 117 150 IPR019734 GO:0005515
Vra3g0930 499 Pfam Tetratricopeptide repeat 309 344 - -
Vra3g0930 499 SUPERFAMILY TPR-like 117 230 IPR011990 GO:0005515
Vra3g0930 499 Gene3D Tetratricopeptide repeat domain 232 467 IPR011990 GO:0005515
Vra3g0930 499 Gene3D Tetratricopeptide repeat domain 113 231 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0930 - - gmx:100813040 816.224