Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0923 ATGGCGTTAATAGTTCTCTCTCTCTTCCTCCTCCTCTTCACCTTCCAACTTCCCTTCCGCTCCTCTGGACAATCGAGCTCCATGGAATCAGTTCCCGATCTTCAGCACACTATGTATGCTTCCATAGAAGGATATCCTTGCGTGCGCCTGTTGAATCTATCTGGAAACATCGGTTGTTCTAATCCTGGACGAGATAAGGTTGTGGCTCCTATTGTACGGTTCGGAAATGTTGACAAAATAGCTGAGCCGTCTGCTGTACTGGTGTCAGTGGAGGACTTTCCAACTCTCTTTACTAGAATATCAGATGACTCTAGATTTGCTAGTAAAGTCAGTGGTGTACTTGTGGAACCAAGTACTGATTTGCAGAATAAGATAAACGGATTTTCTCCGGATCAAAAGTTTCCACAAGGTCAATTTGCACCTTACCATAATACCGGCTATGAATGGAATCCAATTGGTTCTGGTGTTATGTGGAAATCCTACAATTTTCCAGTGTTTTTACTCACAGAAAGTGGGTCAAAGACTCTTCAAGAGTTTGTAACAAAGAATGAGGACAAAAAGAAAGCTTATACTTCTAATGTGGCTGAGTTTGATCTGGTGATGCAGACAGTGAAATCTGGGACACTTGATTCAGAGTCTTGTTTAAAAGAAGAAACTTGTCTTCCTTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCGATCAACACTTCCTCCTTACAGCAGTCTAAGCCCATTTTAATGACAGTGGCATCCATGGATTCTGCTTCATTTTTTCGGGACAAAAGCCTTGGGGCAGACTCCCCTATTTCTGGTTTAATTGCATTACTAGCGGCTGTTGATGCACTCTCTCATTTGGATGGTCTTGGTGACCTTAGTAAACAGCTTGTTTTTGCAGTTTTCACTGGAGAGGCATGGGGTTATCTTGGAAGTAGGAGATTTTTGGTAGAACTTGACTTGCACTCAGATGCTGTTCATGGCCTTAATCATGGATTAATTGAAAAGGTCATTGAAATTGGTTCTGTTGGAAAGGGTCTCAGTGGAGGTGTGAACAACTTTTTTGCTCATACAGAAGGGGATTCTTCTGCCACAAATCAGACAATGACTGCCTTGAAACGTGCACAGGAGTCACTGTTATCTGAAAACATAAAGATAGCATCTGCAAGTTCTTCAAATCCTGGGATACCTCCATCATCTTTAATGTCCTTTTTGGAAAAGAATCCTGCAATCTCTGGTGTCGTTCTTGAAGATTTTGACTCTGTCTTTGTCAACAAGTTCTACCATAGTCACCTAGATGATTTATCAAATGTGAATTCATCAGCTGTTGTTGCTGCTGCTTCTCTTGTTGCCCGTACACTTTACATACTCGCGAGTAAAAATGAAGATGTTCATGATTCAACTTTGTCTACTATAAATGTTAATGTCTCACTTGTTGAACAACTTATGGGTTGCTTGTTGGACTGTGATCCTGGTCTTTCTTGTGAACTGGTGAAGAAATATATTTCTCCCATGTCAACCTGTCCAAGCCATTATGTTGGCGTTATCTTGGATGAACCTTCATCTACACCATATACAGGATACATCAATGATGTTCCCAGGTTCATTTGGAATTTTCTGGCTGATAGGACTTCTATCCCTAGGGAGACTAACAGCTCAGGTTGTCAACACGGTTGCAATGATAGAGATGAAGTGTGCATCAAAGCAGAGACCGATGGAAAGGGAGTTTGTGTTCTCTCTACAACAAGGTATGTTCCAGCATATTCAACACGGCTAAAATTTGAATCAGGAGTGTGGAATGTTTTGCCTCCTAATTCCTCTGAAAAAATGGGTGTTGTGGATCCTGTCTGGACTGAGAGCAACTGGAATTCAATAGGTATGCGAGTCTACACAGTCCAAAATGCTGCTTATGACCGCCTTGTTCTGTTTGGGGGCATCACTTTGACAATCATCTCATACCTTGCAATAGCAACTGCTAGAACCTTGTTTTCCAAAGCAATGAAGAGGGACTGA 2010 0.4179 MALIVLSLFLLLFTFQLPFRSSGQSSSMESVPDLQHTMYASIEGYPCVRLLNLSGNIGCSNPGRDKVVAPIVRFGNVDKIAEPSAVLVSVEDFPTLFTRISDDSRFASKVSGVLVEPSTDLQNKINGFSPDQKFPQGQFAPYHNTGYEWNPIGSGVMWKSYNFPVFLLTESGSKTLQEFVTKNEDKKKAYTSNVAEFDLVMQTVKSGTLDSESCLKEETCLPLGGYSVWSSLPPINTSSLQQSKPILMTVASMDSASFFRDKSLGADSPISGLIALLAAVDALSHLDGLGDLSKQLVFAVFTGEAWGYLGSRRFLVELDLHSDAVHGLNHGLIEKVIEIGSVGKGLSGGVNNFFAHTEGDSSATNQTMTALKRAQESLLSENIKIASASSSNPGIPPSSLMSFLEKNPAISGVVLEDFDSVFVNKFYHSHLDDLSNVNSSAVVAAASLVARTLYILASKNEDVHDSTLSTINVNVSLVEQLMGCLLDCDPGLSCELVKKYISPMSTCPSHYVGVILDEPSSTPYTGYINDVPRFIWNFLADRTSIPRETNSSGCQHGCNDRDEVCIKAETDGKGVCVLSTTRYVPAYSTRLKFESGVWNVLPPNSSEKMGVVDPVWTESNWNSIGMRVYTVQNAAYDRLVLFGGITLTIISYLAIATARTLFSKAMKRD* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0923 669 SUPERFAMILY Zn-dependent exopeptidases 217 454 - -
Vra3g0923 669 Pfam Nicastrin 245 454 - -
Vra3g0923 669 Pfam Nicastrin small lobe 46 203 IPR041084 -
Vra3g0923 669 PANTHER NICASTRIN 19 668 IPR008710 GO:0016021|GO:0016485
Vra3g0923 669 Gene3D Zn peptidases 173 474 - -
Vra3g0923 669 CDD M28_Nicastrin 40 622 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0923 K06171 - gmx:100818367 1183.32