Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0920 ATGGGTGGTGGGAGTCCTCTTCTAGTTATTATTTTGTTCTCGTTCTTGCTAAGAAGTGAGTCATGGGGATGGTTTTCATCATCGAAGGAGACTCCTTCTAGTGACAAGACTTATTCCAATGGAGGCAATTTTAAAGGTTCTAGTGCCGAGTTCTCCATTGAGGCCTTCAACGACCAAAAGGGACTGAAGTTAATAGATAATGCTCAGAAGAAAATGATTAGCTCAAACTCTTGTTGGCAAAATGCATATCAACATCTTTTTGCAGGATGTTCTGAGATCTTGGCTGTTGATGAGAAGAGATCTAGATTAGCTTGGCACCTAAGTGATTGCTTTCAGAGGGATTCTGGAAGATCTCCTTTTCCCCACTGTGACCCCAAAGCTTCTATTGCTTCATGCTTGAGAACCTTAGATGACTTTGCCCATAAGGTTTACCTTGAATTCTACCTTGAAACCAACACCATTTGTTATCAGTTGCAGGCATATGCATTCAAACATGAAACTGAGAGACTTGTGACTGAATTAAAAAGTTCAGCCCAGTATGTCGAGGACAAGTTAGATAACATTGAAGAGAAAACAGAACATCTATTACAAGGCTCTAAACGGGTTCATGAGTCTCTTGATTTAATTGGTAGCCACACTCAACAAGTAGCTCAAACTGCTAGAAATCTGGAAGGTCATATAGATTCTGTATTAATTCATTCACAGAATGTTTTCGAGCAGACTACAAAAATTGCACTGTCACAATCACAGTTACAAGAAGGTCAAGAGGATATGAAGAGAAGTTTGGAGGATGGGGTAACAATGCTCAAAGAATCATATAATTATTTGGGAAAAGAAATTGAAAAGTTAAGGGATGAAGCCACTGAGATAGAGAATGAGGTAATTAAAGTTGGAGATGCCATGTCATTGAGGATGAACACCCTGCAAAGCAAAGCTGAAGATATTGGGAATATGGCTGGGCTTTCCTTAGATAAGCAACAACAACTTTTAGATGGGCAATCCACAGCACTTGAGTCCCTAAACTCATTGATTGAGTTTCAATCCAAGGCACTGGAAGAAAGCAGGAAAACCCTACAATATTTTGCTGAATATGGGCATAGACAACATGAAGAGCTTGTTCGGCGTCAAGAACAGATTCAAGGATTTCATGATCATTTGATGGAAAATTCAAAGTCAATATTGTCTTCTCAGGAATCTTTTGAATTGAAGCAAGCTTCCATGTTTGTTGTTTTAGACCGGATTTTTGCTTTACAAAATGCCTTGTTACTTGAATCTAGAATGATCAAAGCTTTCTTCGTTTATTCCATATCAATATTTGTCATCTTCATGTTGACCAGTACGAAGCAAACATACAATATGAGACCGTTCCTATATATTGAGCTTTTTGCAACTTTCTTTGTGGAATTACTCGTTATTCGTTTAACATGTGACAACACTGAGCTCCAAACCTGGATAACAAATGTGGCCAGATTATTATTCATGGTAGGCGCTTCGGTTCAAGTGCTACATGCCATTTGCACATACAAGGACTATGAGACTTTGAACCATCAAATGCTGTTAACTCTAATTAACAAAGTTAACACCATGCAAAAACAAAAGGAATTGTCATGGGACGTGGATACTGATTACGAGGACTGGTCTGAATGGGTAGATGCTGACTTACCAGATGATGTGAATTGCCTTGACGATCCTGATTTCATACCTTCAGAAGTTGCGGAGAATTCAATCACACCTATGAAAAATTATAACCTACGCTCTCGCAATCTTTACCATTCCATACTAATTTAG 1788 0.3859 MGGGSPLLVIILFSFLLRSESWGWFSSSKETPSSDKTYSNGGNFKGSSAEFSIEAFNDQKGLKLIDNAQKKMISSNSCWQNAYQHLFAGCSEILAVDEKRSRLAWHLSDCFQRDSGRSPFPHCDPKASIASCLRTLDDFAHKVYLEFYLETNTICYQLQAYAFKHETERLVTELKSSAQYVEDKLDNIEEKTEHLLQGSKRVHESLDLIGSHTQQVAQTARNLEGHIDSVLIHSQNVFEQTTKIALSQSQLQEGQEDMKRSLEDGVTMLKESYNYLGKEIEKLRDEATEIENEVIKVGDAMSLRMNTLQSKAEDIGNMAGLSLDKQQQLLDGQSTALESLNSLIEFQSKALEESRKTLQYFAEYGHRQHEELVRRQEQIQGFHDHLMENSKSILSSQESFELKQASMFVVLDRIFALQNALLLESRMIKAFFVYSISIFVIFMLTSTKQTYNMRPFLYIELFATFFVELLVIRLTCDNTELQTWITNVARLLFMVGASVQVLHAICTYKDYETLNHQMLLTLINKVNTMQKQKELSWDVDTDYEDWSEWVDADLPDDVNCLDDPDFIPSEVAENSITPMKNYNLRSRNLYHSILI* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0920 595 PANTHER PROTEIN GAMETE EXPRESSED 1 8 587 IPR040346 -
Vra3g0920 595 Coils Coil 273 300 - -
Vra3g0920 595 Coils Coil 171 191 - -
Vra3g0920 595 PANTHER PROTEIN GAMETE EXPRESSED 1 8 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0920 Vra-Chr3 9227789 9231551 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0920 - - gmx:100814301 984.941