Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0914 ATGGAGAAAGCAAGCACTAAATCTGCTTTGAAGTTTGTGAAGAACACTTCTCAGTCTGCAGCTCAATGGAGCAGTACTAATTCTAGAGGAATGGCTTCAAGAAGGTCTCCACCCAAAGAAAGTACATTGGCTCCACCAAAGTCTCCACCAAGGTCTCCACCCAAAGAAAATACTAAGCCACAGGAATTCAAACTCCACACTCAAGAAAGAGCTGTCAAGCGTGCAATGTTCAATTATGCTGTGACAACAAAATTCTATATCATGGAGCTGCAAAAGAAACAAGAGGAGAGGCTGCAAAAGTTGATTGAAGAGGAAGAGGTTCGTTTGCTAAGGAAGGAAATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTCTTCCCACAAAGATCAAGCAGGAGTGTTCCAAGAGAATCGTGCCTCCACATGATGAGCAGCAAGTGCTGGAGCTGCAGCGTTGGCAATGAAATTTACAGCTTGCACCACTATGGTCACCAAGCTCTCAAACCCATCAAGTAG 525 0.4381 MEKASTKSALKFVKNTSQSAAQWSSTNSRGMASRRSPPKESTLAPPKSPPRSPPKENTKPQEFKLHTQERAVKRAMFNYAVTTKFYIMELQKKQEERLQKLIEEEEVRLLRKEMVPRAQLMPYFDKPFFPQRSSRSVPRESCLHMMSSKCWSCSVGNEIYSLHHYGHQALKPIK* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0914 174 PANTHER TARGETING PROTEIN FOR XKLP2 1 167 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Vra3g0914 174 Coils Coil 88 108 - -
Vra3g0914 174 MobiDBLite consensus disorder prediction 9 35 - -
Vra3g0914 174 Pfam Targeting protein for Xklp2 (TPX2) domain 63 135 IPR027329 -
Vra3g0914 174 MobiDBLite consensus disorder prediction 1 65 - -
Vra3g0914 174 MobiDBLite consensus disorder prediction 42 56 - -
Vra3g0914 174 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0914 Vra-Chr3 9156804 9159880 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0914 - - gmx:100305850 292.737